Solanum stenotomum: 125875779
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Entry
125875779 CDS
T08385
Name
(RefSeq) DNA polymerase I B, chloroplastic/mitochondrial-like
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sstn
Solanum stenotomum
Pathway
sstn03030
DNA replication
sstn03410
Base excision repair
sstn03420
Nucleotide excision repair
sstn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125875779
03410 Base excision repair
125875779
03420 Nucleotide excision repair
125875779
03440 Homologous recombination
125875779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sstn03032
]
125875779
03400 DNA repair and recombination proteins [BR:
sstn03400
]
125875779
Enzymes [BR:
sstn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
125875779
DNA replication proteins [BR:
sstn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
125875779
DNA repair and recombination proteins [BR:
sstn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
125875779
NER (nucleotide excision repair)
GGR (global genome repair) factors
125875779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
125875779
NCBI-ProteinID:
XP_049412772
LinkDB
All DBs
Position
9:57160691..57170274
Genome browser
AA seq
1119 aa
AA seq
DB search
MAFLGLSVQSSPFKPTSYVWFSPHSFSSRTFWASSGKALHRGEDCKTRSIENASSSLAVL
GDPIKQISSHERKLFSSGLQQKIEEDSIYGWNAEIDAIKALKAKSAYNSFKKLSAANCSV
SASTNRKVKDENFDVPIEVNTRMMRERVTSSYSATTCISGGSLSSKSKPPYNPNRGEKKD
VGNWREYKNHLPQLSVGINHSRNNEVTSINKVDGPNVSHYKPLSKGSLLNGQLSSKIMEA
KLEKANKLWEGNPSNQIRDNVNGTDTKVVTVKAKSVIQEQATNKREKNAIKSVATDFVNG
TETKIVSDEGTGLGQITLRERLGAMYEKVHIVDNLSAAKEVVSKLTSQYKHLVHACDTEA
SNIDVKQQTPVDHGEVICFSIYSGPEADFGDGKSCIWVDVLDGGGKDLLVEFAPFFQDPS
IRKVWHNYSFDKHVIENYGFKVSGFHADTMHMARLWDSSRRILGGYSLEALTGDSHVMCD
ARLVHAERLFHDEGLFGKISMKTIFGRKKLKKDGTEGKVTMIPSVEELQRTERELWICYS
ALDSISTLMLYESLKKKLSKRIWTFDGVRKGSMYEFYEKYWRPFGELLVQMETEGVLVDR
AYLAEIEKVAKAEQLVAVNRFRNWAAKYCADAKYMNVGSDTQLRQLFFGGIQNRRNIDES
LPNEKEFKVPNVDKVIEEGKKAPTKFRKIHLHRICDPINTEIFTASGWPSVSGDALKALA
GKVSADFDIFDEVDGNAEEVPETSVDEALTTNNEALSQNPEISAYGTAYHAFGGGQKGIE
ACHAIAALCEVCSIDSLISNFILPLQGHDVSGENGRIHCSLNINTETGRLSARRPNLQNQ
PALEKDRYKIRQGFVAAEGNSLIVADYGQLELRILAHLANCKSMLGAFKAGGDFHSRTAM
NMYPHIREAVEKGQVLLEWHPEPGEDKPPVPLLKDAFGSERRKAKMLNFSIAYGKTTIGL
SRDWKVSVKEAKETVERWYSDRKEVSDWQEQRRFEAREFGRVHTLLGRARWFPSVKNATG
SVKGHIERAAINTPVQGSAADVAMCAMLEISKNARLKELGWKLLLQVHDEVILEGPEESE
KEAMAIVVHCMSNPFNGKNILRVGLSVDAKCAKNWYSAK
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atggcatttttgggtctttctgttcaatcttccccttttaaacccacttcttatgtttgg
ttttctcctcattctttctcttctcgcactttttgggcttcttctggtaaagcccttcac
aggggggaagattgcaaaactcggagtatagaaaatgcatcttccagcttagctgtgctt
ggcgatcccattaaacaaatatcaagtcatgaaaggaagttattctctagtggattacaa
cagaaaattgaagaagacagtatttacggatggaatgctgaaattgatgctattaaagct
cttaaagcaaaaagcgcctataatagttttaaaaagctttcagcggcaaattgcagtgtt
agcgcctccacaaatcggaaggtgaaagatgaaaattttgatgttccaattgaagtcaat
acgagaatgatgcgtgagcgtgtcacctctagctattctgctacaacctgtatttcagga
ggcagcttatcttcaaaaagcaaaccaccttataaccctaatagaggagagaagaaagat
gtcggaaactggagagagtataaaaaccatttgcctcaactatctgtaggtatcaaccat
tcaagaaacaatgaagtcacatcaataaataaggttgatggtcctaatgtatctcattac
aaaccattgtcaaaaggttcccttcttaatgggcaattgtcgagcaaaattatggaagcc
aaattggaaaaagcaaataaactttgggagggtaatccatctaatcaaataagagacaat
gtgaatgggactgataccaaggtggttactgtcaaagcaaaaagtgttatccaggagcaa
gcaactaataaaagggaaaagaatgcaattaaatccgtggcaactgattttgtaaatggg
actgagactaagattgtcagtgatgaaggaacaggtttaggtcagattaccctccgtgag
aggctgggtgcaatgtatgaaaaagtgcatatagttgacaatttatcagcagccaaggaa
gttgtcagcaaacttacaagtcagtacaagcatctcgtccatgcatgtgatacagaggca
tcgaatattgatgttaagcagcaaacacctgttgatcatggagaagttatatgcttcagt
atttattctggaccagaggctgattttggtgatgggaaatcttgtatctgggtagatgtt
cttgatggaggtggcaaggacctattagtcgaatttgctccgtttttccaagacccatcc
atcagaaaggtctggcacaattatagcttcgacaagcacgtcatagaaaattatgggttt
aaagtatctggttttcatgctgacacgatgcacatggcacgactttgggattcctctaga
cgaattttgggtggttattcattagaggcactaacaggtgattctcatgtcatgtgtgat
gctagactggtccatgctgaaaggctgttccatgatgaaggtctgtttggtaaaatatct
atgaaaactatctttggtcggaaaaagctgaagaaagatggaactgagggtaaagtaacc
atgattccttctgtcgaagagttgcaaaggactgaacgagaattgtggatttgttattct
gcattagactccatcagcacattgatgctttatgagagcttgaagaaaaaactatctaaa
cggatctggacattcgatggagttcgtaaaggatccatgtatgaattttatgagaaatac
tggcgtccatttggtgagcttctagttcaaatggaaactgagggtgtgctggttgaccgt
gcctatcttgctgagattgagaaagtggctaaagctgagcagctggttgctgtgaataga
tttcgtaactgggcagctaagtactgtgctgatgcaaagtacatgaatgttggaagtgac
acacagttgcgtcagctgttttttggtggcatccagaatagaaggaatattgatgagagt
ctaccaaatgagaaagaattcaaagttccgaatgttgataaagtaattgaagaaggaaag
aaggctcccaccaaatttcgtaaaatccatctacataggatttgtgatcctatcaacact
gagattttcactgccagtggttggccttctgttagtggagatgctttgaaggctctcgct
ggcaaagtttctgcagactttgatatttttgatgaagtggatggcaatgctgaggaagtt
cctgaaacaagcgttgatgaagctttaactacaaataacgaagctctcagtcaaaaccca
gaaatttcagcttatggaacagcctaccacgcctttggaggtgggcagaaaggaattgag
gcttgccatgccattgcagccttatgtgaagtttgctccatagactctttaatatccaac
tttatcctccccttgcagggtcatgatgtgtcaggtgaaaatgggcggattcattgctcc
ctgaatattaatactgaaactgggcgcttgtctgcaaggagaccaaatttacagaaccag
cctgctctggagaaagataggtataaaattcgccaaggttttgtagctgcagaggggaat
tccttgattgtggctgactatgggcagttggaactaaggattcttgcacatcttgccaac
tgtaagagcatgttgggtgcattcaaagctggtggagacttccattcaaggactgctatg
aatatgtatcctcacatccgtgaagccgttgaaaaagggcaggtacttcttgagtggcat
cctgaaccaggtgaagacaaaccaccagttcctctgctaaaggatgcttttggctctgaa
agaaggaaggcaaagatgctcaatttttcaattgcgtatggaaaaactacaattggactc
tcacgcgattggaaggtatctgtaaaggaagcaaaggaaacagttgaacgttggtatagt
gatagaaaagaagtgtcagattggcaggaacaacgcagatttgaagcacgcgagtttgga
cgtgttcacacacttctaggacgagcacgctggtttccatcagtaaaaaatgcaactgga
tccgtaaaaggccacatagaacgagctgctatcaatactccagtgcagggaagtgctgca
gatgtcgctatgtgcgccatgttagagatatcaaagaatgcacgactaaaggagcttgga
tggaaattgcttttacaggttcatgatgaagttattttggaaggaccggaagaatctgaa
aaagaagccatggcaatagtggttcactgcatgtccaatccttttaatgggaaaaatatt
ctcagagtaggcttatctgtcgatgctaaatgtgctaaaaactggtattctgccaagtag
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integrated database retrieval system
