Solanum stenotomum: 125876018
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Entry
125876018 CDS
T08385
Name
(RefSeq) upstream activation factor subunit spp27-like isoform X1
KO
K15223
upstream activation factor subunit UAF30
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sstn03021
]
125876018
Transcription machinery [BR:
sstn03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
125876018
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Gene cluster
GFIT
Motif
Pfam:
SWIB
DEK_C
Nop14
LisH_TPL
DUF3841
CDC45
CCDC106
Zip
Motif
Other DBs
NCBI-GeneID:
125876018
NCBI-ProteinID:
XP_049413072
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All DBs
Position
1:complement(3428307..3431750)
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AA seq
336 aa
AA seq
DB search
MVSDSVLVDRLREILRVSDLEIATAGTVRRRLEEELGVDLLDRKAFIRDQIDLFLRIQVE
ETPKNDVHEAENGKEGENDDSCSQEEQEEEQVKEDENGDSCSQEEELGEDKSATRSKKKA
RRSEKMNGEAKKKGGFNKPCALSPQLQKLVGEPELGRPEVVKKIWAYIREKNLQNPENKR
KILCDEVLSGIFQVKSIDMFQMNKVLSKHIWPLNEENGTQVKTSVKRRLPKKGRVEALDE
PKQKEKRQKGGGSGFLAPVQLSDALVKFLGIGENALPRADVIKRIWQYIKENKLQDPSDK
KTIICDERLKELFQVDSFHGFTVTKLLTAHFIKKED
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggattccgtgttggttgaccggctccgggaaatactccgagtttccgacctt
gaaattgccaccgccggcaccgttcgtcggaggcttgaggaggaacttggggtcgattta
cttgacaggaaagcatttatcagggatcaaatcgaccttttccttcgaattcaggttgaa
gaaactccaaagaacgacgtacacgaagcagagaatgggaaggaaggtgaaaatgatgat
tcttgctcccaagaagaacaagaggaagaacaagtgaaggaagatgaaaatggcgattct
tgctcccaagaagaagagttgggtgaggataagagtgccacaaggtcaaagaagaaagcg
cgtaggtctgagaaaatgaatggagaagcaaagaaaaaagggggatttaacaaaccatgt
gcactttctccacagcttcagaaattggttggcgagccagaacttggcagaccagaggtc
gtcaagaagatttgggcctatatccgggaaaagaatttacaaaacccagagaacaagcgg
aaaattttatgtgatgaagttttgagtggaatttttcaggtcaaaagtatagacatgttc
cagatgaacaaggtgctatccaagcacatttggcccttaaatgaggaaaatggcactcaa
gtcaaaacttctgtgaagagaaggctaccgaaaaaaggcagagtagaagctttagatgag
ccaaagcagaaagagaaaaggcagaaaggtggaggatctggttttcttgctccagttcaa
ttatcagatgctcttgtgaaattcttaggtattggtgaaaatgcattgccgcgagctgat
gttattaagcgaatatggcaatatataaaagaaaataagctgcaggatccatctgataag
aagacaatcatctgcgatgaaaggttaaaagaactatttcaagttgattccttccatggc
ttcacagttacaaagctattgactgctcattttatcaaaaaagaagactga
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