Solanum stenotomum: 125876029
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Entry
125876029 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125876029
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
sstn
Solanum stenotomum
Pathway
sstn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125876029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sstn03041
]
125876029
Spliceosome [BR:
sstn03041
]
Complex B
Other components
Prp19-related factors
125876029
Complex C
125876029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
Motif
Other DBs
NCBI-GeneID:
125876029
NCBI-ProteinID:
XP_049413088
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All DBs
Position
9:7815947..7816840
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AA seq
297 aa
AA seq
DB search
MSTDERRVHPNCGNGSNPYHECSEYCFKIIAKIKKQMIKAETGVLQANNTVDVHRSDERD
GVESHSDDGEDNMGEESVNLITGRKRKLFELRLKMNEARKANQSAMVVEKKKTEAPPAEC
RGMSKQKWIEERKKKIGNLLDAKGLDMSKAYMLDTQESAETKYKKWEKEPAPAGWDVFNK
KTLYNAYKKRTKNVAVDVDEYNRMKETDPEFYREASSLQYGKAPKLSDDKIERMVKELKD
RDEKSQSFSRRRKFHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNLERGSALPD
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgacgaaagaagagttcacccaaattgtgggaatggttcgaacccttatcat
gaatgcagtgaatattgcttcaaaataatagcgaaaataaagaagcaaatgatcaaagct
gaaacaggtgtgttgcaagctaataatacggttgatgttcatcgctccgatgaaagagat
ggagttgaaagtcacagtgatgatggagaggataatatgggagaagagtcggtgaatctg
ataacagggagaaagaggaagttatttgaattgaggttaaaaatgaatgaggcaagaaaa
gcgaatcaatctgcaatggtagtagagaagaaaaaaacagaagctccacctgcagagtgt
agaggaatgtccaagcaaaaatggattgaagagaggaagaagaaaattgggaatttgttg
gatgccaaagggttagatatgagcaaggcatatatgctagatacacaagagtctgcagag
acaaagtataagaaatgggagaaggagcctgctccagctggttgggatgtttttaataag
aagacgctatacaatgcatacaagaagcggacaaagaatgttgctgttgatgtagatgag
tacaatagaatgaaggaaactgatccagaattttatcgagaagcttcaagtctccagtat
ggaaaggctccaaaattgtcagacgacaagatagagaggatggtgaaggagctaaaggac
agggacgagaagagccaatcatttagtcggaggagaaagttccatgaagagaaagacatt
gactctattaatgatcgtaacgagcatttcaataaaaagattgagcgtgcctttggaaaa
tacaccttggagatcaagaataaccttgagagaggatctgctttgcctgattga
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