Solanum stenotomum: 125876150
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Entry
125876150 CDS
T08385
Name
(RefSeq) threonine--tRNA ligase, mitochondrial 1-like
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125876150
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sstn01007
]
125876150
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sstn03016
]
125876150
Enzymes [BR:
sstn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
125876150
Amino acid related enzymes [BR:
sstn01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
125876150
Transfer RNA biogenesis [BR:
sstn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125876150
Prokaryotic type
125876150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_His
PTPS
Motif
Other DBs
NCBI-GeneID:
125876150
NCBI-ProteinID:
XP_049413220
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Position
9:complement(56894448..56895738)
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AA seq
413 aa
AA seq
DB search
MGQENVETLEEANKYDHRELNKKQELFYFDPMSPGSCFFLPHGARICNKLLEFLKNEYWK
RGYEEIWSPDIYKMQLWETSGHAAKYKENMFVFEIDDKAVEQLGLKPMNCPGHCKVFGHR
VRSYRELPLRLADFGALHRNEASGALTGLTRLRQFHQDDAHIFCRESQIKDEVKGVLDFI
SYVYAIFGFSNIDFKLSTRPEKYIGNLQSWKKAEDALAEALNEFGKPWEINKGDGAFYGP
KIDISVSDAMKRNLQCATLQLDFQLPERLNLLYIAENDQIRERPVMIHRAILGSVERMFA
ILFEHYKGKWPFWLSPRQAIICPVSNKSQAYAFEIWKRLHDARYHVDIDVSDKTVGKKVR
EAQLVQYNYILVVGEEEAKNGQVSVRVRDKRDHQVMTVDELLDQFKDMVASFQ
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaggaaaacgtcgagacgctggaggaagcaaacaaatatgatcacagagaacta
aacaagaagcaggagcttttctattttgatccaatgagccctggaagttgcttctttctt
ccacatggtgctcgaatttgcaacaaattactcgaattcttgaagaatgagtactggaaa
agaggctacgaggagatttggagcccagatatatacaagatgcagttatgggaaacttca
ggtcatgctgcaaagtacaaggaaaacatgttcgtgttcgagattgatgataaagcagta
gaacaattggggttgaagccaatgaactgccctggacattgtaaagtattcggtcacaga
gttcgttcctacagagagctaccccttcgtctggctgatttcggagctcttcacaggaac
gaagctagtggtgcccttacaggtttaacacgtctcaggcaatttcaccaggacgatgct
cacatcttctgcagggagtcacagatcaaggacgaagtaaaaggcgtcctggatttcatt
agttatgtgtatgccatatttggtttcagtaatattgacttcaagttatcaacaagacct
gaaaagtatatcggaaacttacaaagttggaagaaggctgaagatgctcttgctgaagca
ttgaacgaattcggaaagccctgggagatcaacaaaggggacggagctttttatggtccg
aaaatcgatatcagtgtatctgatgcaatgaaaagaaacttacaatgtgcaacattgcag
cttgatttccagcttcctgaaagactcaaccttttatacatagcagaaaacgatcaaatt
cgagaaagaccagttatgatacacagagctatacttggatcagttgaacgaatgttcgct
atcctctttgagcattacaaaggtaaatggcctttctggcttagtcctcgtcaagctatt
atctgtcctgtttccaacaaatctcaagcgtacgcgtttgagatctggaaacgattacat
gatgctcgttatcatgttgatatcgatgttagtgacaagacagttgggaaaaaggtacgt
gaagctcaactcgtacaatataactatatactagttgttggagaagaggaagctaagaac
ggtcaggttagcgttcgagtcagagacaaacgtgatcatcaagtcatgactgttgatgaa
ctccttgatcagttcaaagatatggttgcatcgtttcagtag
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