Solanum stenotomum: 125876163
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Entry
125876163 CDS
T08385
Name
(RefSeq) autophagy-related protein 8C-like
KO
K08341
GABA(A) receptor-associated protein
Organism
sstn
Solanum stenotomum
Pathway
sstn04136
Autophagy - other
sstn04145
Phagocytosis
sstn04156
Integrated stress response (ISR) signaling pathway
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
125876163
04136 Autophagy - other
125876163
09143 Cell growth and death
04156 Integrated stress response (ISR) signaling pathway
125876163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125876163
04121 Ubiquitin system [BR:
sstn04121
]
125876163
03029 Mitochondrial biogenesis [BR:
sstn03029
]
125876163
Membrane trafficking [BR:
sstn04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
125876163
Ubiquitin system [BR:
sstn04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
125876163
Mitochondrial biogenesis [BR:
sstn03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
125876163
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG8
APG12
Motif
Other DBs
NCBI-GeneID:
125876163
NCBI-ProteinID:
XP_049413240
LinkDB
All DBs
Position
9:complement(56939705..56946695)
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AA seq
163 aa
AA seq
DB search
MAKSSFKLEHPLERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ
FVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEEHKDEDGFLYMTYSGENTFGSCF
SESSESSRFVCNGDVCVLRDHNKVTDQKKKKKISLRIPFSPRK
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaagctccttcaaattggaacacccgcttgagaggcgacaggctgaagctgct
cgtatcagggagaagtaccctgatagaataccggtgattgttgagaaagctgaaagaagt
gacatccctgacattgacaagaaaaagtatttggttcccgcagatctgactgttggccaa
tttgtgtatgttgttcgcaagaggattaagctcagcgctgagaaggctatttttatcttt
gtgaagaatatcctcccccctacagctgccatgatgtctgccatttatgaggaacacaag
gatgaggatggcttcctgtacatgacctacagtggcgagaataccttcggatcctgtttc
tctgaatcttcagaatcaagccgattcgtctgcaatggcgacgtttgtgttcttcgcgat
cacaacaaagtcactgatcaaaagaagaagaagaagataagcttgaggatccctttttct
ccgcgtaaatag
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integrated database retrieval system
