KEGG   Solanum stenotomum: 125876225
Entry
125876225         CDS       T08385                                 
Name
(RefSeq) uncharacterized protein LOC125876225
  KO
K14552  NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
sstn  Solanum stenotomum
Pathway
sstn03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    125876225
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sstn03009]
    125876225
Ribosome biogenesis [BR:sstn03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    125876225
SSDB
Motif
Pfam: Beta-prop_WDR75_2nd Beta-prop_WDR75_1st WD40_Prp19 WD40_WDHD1_1st WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EML_2 WDR55 WD40_CDC20-Fz Beta-prop_IFT140_1st EIF3I Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 125876225
NCBI-ProteinID: XP_049413305
LinkDB
Position
9:55552533..55563163
AA seq 811 aa
MITGGRSLISSQPAFSNDAKKFLVCTGNTVSIFSTSTGLQIAELEGHRGLVTSVVVVPST
TPAGKLLCYCWTSSEDGTIKYWDFSVPELMRSIDVKLPIHSMVIPDLSSQPRESSEKPSD
LFAYVSVIVLKEQLGGSCALWWQIRKCNLTKSTLVGGVTLAESKNTLSITLSCSGRYMGV
CDKRKLRIWEIPTKDSDHSVLQNIRLHHTKTLSTLAFHPTDRIVSAGDVTGRILIWRGVG
EHNFSSGNKQRSGGLMKDMEENPGVRDKDEADICTTRHWHSAEVKVLFFSSDGAYLYSGG
KEGVLVVWQLDTGKQKFLPRIGSPLLYFTISSDPSLASISCADNRIHLLKMPSMEVSRSI
QGIKLRSMVLDISDGSSEGIVFDSATGVVAIRSENYCIQFYSLFDDREVSEVQVCERSHQ
PADEVTVVVDLVALSPEGSIMITVETRFAEEGIGGLVSLKFWSCSSSNKDFSLSTVVYEP
HRDSGISSIAFHPLRHMAVTTSRGADFKVWISSQEMQQKDQMQNAGWTCHSVGSYKKKPM
TAAAFSGDGSVLAVAAERVITLWDPERNILVATVGESLEPISSLAFIGKSEYVVTTSQGS
KAQVSVWSMSKLSVSWSYKLKIEAVTCAMDDSLFAILTLLPKPVGPLMSNEATTLDGDGV
ILLFRAADHVPIGIWFVRKAKGASLAFIRGSPKSEDGVTDGRSVQLLLAYLSVDHEYMLF
DPLNSHTHIHKISRGNLADLEETGKFGYASLYGDLPDFSLERKQAPSITSVPSERYWETL
FSGPSHNLPPLAKLCSTFLESLLQKRSSAVE
NT seq 2436 nt   +upstreamnt  +downstreamnt
atgattactggcggaagaagtttgatttcttcacagccggcgttttcaaatgatgcgaag
aagtttctcgtatgcacaggaaacaccgtttctatttttagcacctccactggcttacag
attgctgaattggaaggtcataggggattggtaacatcggtggtggtagtaccatctact
actccggcaggcaaactattgtgctactgctggacatcatctgaggatggtactattaaa
tattgggacttttcggtgccggagctgatgagaagtattgatgttaagttgcccattcac
tcaatggttattccagatttatcatcacaacccagagagagtagcgaaaagccttctgat
ctttttgcatatgtgtctgtcatagtgttgaaagaacagctgggaggaagttgtgcttta
tggtggcagataaggaagtgtaacttaaccaaatctactttggttggtggagtgactctg
gctgagagtaaaaacacactatctataacattaagctgctctggaagatacatgggcgtc
tgtgacaagcgcaagcttcgcatttgggaaataccaactaaagattctgatcattcagtg
cttcagaacatcagattacatcatacgaaaaccctgagcactctagcttttcatccaaca
gatagaatagtttcagctggagatgtaacaggaaggatcttaatatggaggggtgttggg
gagcataatttctcatctggaaacaaacagagaagtggaggactaatgaaggacatggag
gagaatcctggagttagggataaagatgaggctgatatttgtaccacaaggcattggcac
tctgcagaagtgaaagttctctttttttcttccgacggtgcctatctttactcaggtggg
aaggaaggagttctcgtggtttggcagttggacactgggaagcagaaattcctcccgcga
ataggatccccccttttgtattttaccatctcatctgatccttctctggcctctatatct
tgtgcagataaccgaattcaccttcttaaaatgccttctatggaggtatcgaggtccatt
caaggaatcaagcttcgtagcatggtcttggatatatctgacggctcatctgaaggaatt
gttttcgactctgccacgggggtagttgccattcgttcagaaaattactgtatccagttc
tatagcttgtttgatgaccgtgaggtttctgaggttcaggtttgtgaaagaagccaccaa
ccagctgatgaagtcacggtggtagtggatttggtcgccctctctccagagggttccatc
atgattacggtagaaaccaggtttgctgaagaaggaataggaggtcttgtaagtttgaag
ttctggtcatgcagctcttcaaataaagacttcagcttatccacagtggtctatgagccc
cacagagattctggtatttcgtccattgctttccatcctttgcgtcacatggctgttacc
acctcacggggtgctgatttcaaggtttggatcagcagtcaggagatgcaacaaaaagac
cagatgcaaaacgctggatggacatgccattctgttggttcctacaagaaaaagccaatg
acagctgctgccttttctggagatggttctgttctggctgtagctgcagaaagagttatt
acattgtgggatccagagaggaatattcttgtggctacagttggggagagtcttgagcca
atctcttccttagcatttattgggaagtcagagtatgttgtaaccacatcgcaaggttct
aaggcacaagtatcagtgtggagcatgtcaaagctgtctgtatcatggtcttacaaactt
aagatagaagctgtaacttgtgcgatggatgactccttgtttgccatcctgacccttctc
ccaaagccagttggacctctgatgtctaatgaagccacaactctggatggcgatggagtg
atcttattattcagggctgcagatcatgttcccatagggatctggtttgtaagaaaggca
aaaggtgcttcacttgctttcattcgcggaagtcctaagtcagaggatggtgttactgat
ggcagatcagtgcagttactattagcttacctcagcgttgatcatgaatatatgcttttt
gatccactcaacagccacacccatatacataagataagccgaggaaatcttgctgatctt
gaggaaacagggaagttcggatatgcatctctgtacggggacctaccagactttagctta
gagagaaaacaagctccatcgatcacatcagtaccatcagaaagatattgggagacgcta
ttcagtggaccatctcacaatcttcctcctcttgctaaattgtgttccacattcctggaa
tcattactacagaagaggagtagtgcagttgagtga

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