Solanum stenotomum: 125876241
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Entry
125876241 CDS
T08385
Name
(RefSeq) F-box protein SKIP22-like
KO
K10293
F-box protein 7
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125876241
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125876241
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UN_NPL4
F-box
F-box-like
OTU1_UBXL
YukD
Motif
Other DBs
NCBI-GeneID:
125876241
NCBI-ProteinID:
XP_049413334
LinkDB
All DBs
Position
1:96932488..96934291
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AA seq
502 aa
AA seq
DB search
MKLRIRCFETKETIKIDVQSSSCTLQELKNRITQALPSSSTPNSVHLSLNRKDELQSSEE
DTLQSIGITSGDLIFFTQNPIGFSISTETHIPKLKKSDTQIVQESEIVKKLDTQFVHESE
TVKEMDTQIDQSEPHETKTQNSIPGGEEMEEFMEVDDNGDYSDVNFTKSFSVPGFLRKVF
TEELNDDDGSRDHKLLVVAVHAVFVESGFVLLDPITFTEVSVSQFLKYWSSGSRKTLFYT
IPEVIDHVKGGNCNVIHCIELKFQSLGKFFIAHGSLSGGGLVSTFRVTLNEDQLVPFLNV
VWANCGLNEVVDGDFGEKEVFVFWRNVKDGLVLPLLIDLCEKSGLVLPPCFTRLPTDLKL
KILESLPGVEIAKVSCLSSELRYLGSSEDLWKKKYVEQFGDGEISGEGGHWKEKFVKSWE
SRKRRKVINRRRVVDGLRILGGRHPFPVPWMPHVIGGDYDLFPPQFDNTGNPLGRAPPSR
LLHPWSNHVRRCHLGGHRSNFP
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcagaatcagatgcttcgaaaccaaagaaaccataaaaatcgatgtacaatct
tcatcctgcactcttcaagaactcaaaaatcgaatcactcaagcattaccatcatcatca
acaccaaattccgttcatctttctctcaatcgaaaggacgaacttcaatcttctgaagaa
gatacgcttcaatcgattggtattacctcaggtgatcttatcttcttcactcaaaatcca
attgggttttcaatttcaactgaaacccatatccccaaattgaaaaaatcggacacccaa
atcgtccaagaatctgaaatagtgaaaaaattggacacccaatttgttcatgaatctgaa
acagtgaaagaaatggacacccaaatcgaccaatcggaaccccacgagacgaaaactcaa
aattctatacctgggggtgaggaaatggaggagtttatggaggtagatgataatggagat
tacagtgatgtgaattttacgaaatcgttttctgtacctgggtttttgaggaaagtgttt
acagaggagctaaacgatgacgatggtagccgtgaccataagctgttggtggttgctgtt
catgctgtttttgtagaatctgggtttgttcttcttgaccctattacgtttactgaagtt
agtgtatctcaatttttgaaatattggtcttctggatctcgaaagacactgttttacacc
atacctgaggttattgatcatgtaaaaggaggtaattgtaatgtgattcactgtattgag
ttaaagtttcagtctttagggaagttctttattgctcatgggtcattatccggtgggggg
ttggtttccacgtttagagtgacgttaaacgaagatcaattggttccgtttttgaatgtt
gtgtgggctaattgtggattgaatgaggtagtagatggggattttggagagaaggaagtg
tttgtgttttggaggaatgtaaaggatgggcttgtattgccattgttgattgatttgtgt
gaaaagtctggtttggtgcttccaccgtgctttacgcgacttccaacggaccttaagttg
aagattttggagtcacttccgggtgttgagatagcgaaagtgagttgtttgagctctgaa
ttgcgatatttgggttcgagtgaggatttgtggaagaagaaatatgtggagcagtttggt
gatggtgagatatcgggagaaggaggacattggaaagagaagttcgttaagtcttgggag
agtaggaagagaaggaaagtgattaatagaagaagagtggttgatgggttgcgaatttta
gggggtcgtcatccatttccggtaccttggatgccacatgtaatcggtggagattatgat
cttttccctccacaatttgataatactggaaatccgttagggcgggcaccaccttctcga
ttgctccatccgtggtcaaaccatgtacgtcgttgtcatcttggaggacataggagcaac
ttcccttga
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