Solanum stenotomum: 125876398
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Entry
125876398 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125876398
KO
K14794
ribosomal RNA-processing protein 12
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sstn03009
]
125876398
Ribosome biogenesis [BR:
sstn03009
]
Eukaryotic type
90S particles
Other 90S particles
125876398
Pre-60S particles
Other pre-60S particles
125876398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_Maestro
MMS19_N
Motif
Other DBs
NCBI-GeneID:
125876398
NCBI-ProteinID:
XP_049413539
LinkDB
All DBs
Position
9:14965798..14980274
Genome browser
AA seq
1293 aa
AA seq
DB search
MEGIEMELPFPENSSDDFCNTVLSQFCDSNNEHHVHICTAIGTMSQELREQSFPLTPIAY
FGATCSSLQTLYTAAPEGPPSHLIDALSTILSLVVPRINQAMLRKKYEYLSDVMIQLLGL
KTIGIEGIVSCLKCVVHLLIVGAKGNWSDVAQLYGLFIGYITDDRQKVRKMSHNCLRDLL
QNFQSSSVLAPLLAPASEAITNLFERSLLLAGGTTVNASERPKGAQEVLHVLDALKLCLP
FMSSKYLNSTLKYFKSLLELHQPLVNRRITDGLNALCIHPTAEVSPEVLLDLLGSFAASV
SANESSADTLTFTARLLGIGMRKVYSINRQLCVVKLPVVFNSLSDVLGSEHEEAIRAALE
ALKSLIHECIDENLIKQGVDNIISSNTDMKKSGPTIIEKICATIESLLTYHYAAVWDMSF
QVVVAMFDKLGCYSSHLLKGTLQSLADMEKLPDEDFPFRRQLHECVGSAVGAMGPESFLT
LLPLKLDAQDLSESNIWLFPILKQNIVGAHLSFFTNSILSMVAAMKQRSAMLEREGKIYS
ARTIDGIVYSLWSLLPSFCNYPVDTAESFKDLEKVFRKALHEEPDVCGIICSSLQILIQQ
NNSILKGKVDLSDTETSVSRERAIARYNQQVADNNLNTLSLSAQKLLPVLYDVFLKSSKD
TGGFLQRTIGVLASIADKVREKSLDQSKGKRRVVRVLFTKIMQRLLEVTQEVGEAGKDKK
SHSMQIDDSSSKSSSLERAQLFDLAVSFLPGLNAQEIGVLFGALKPALKDEEGLIQKKAY
KVLSMILQDCDEFISTKTEELLNLMIETLPACHFPAKRHRLDCLYFLIVHVTKDKSEQRR
RDSITSFMTEILLALKEANKKTRNRAYEILVKIGHACADEDKGGRKENLHQFFNMIAGGL
AGETPHMISAAVKGLARLAYEFSDLVSAAYSVLPSTFLLLKRENKEIIKANLGLLKVLVT
KSTADGLQAHLKNMVEALLGWQNSTKNHFKAKVKLLIEMLIKKCGLDAVKEVMPEGHMKL
LTNIRKIKERRDRSLASNSEESKSRMTKATTSRLSRWNHTKIFSEFDDGESENSDAEYMD
TKTTAGRRSKATLVSDSKASLLRSKKTRKLAKSLQEDLFDQLDDEPLDLLDQKKTRSALR
ASGNLKRKPESEDEAEIDSEGRLIIHEGDKKQKRVKPTTDDLDVRSKAGSRFSESSRNSQ
KRRRTSDSGWAYTGTEYASKKAGGDVKKKDKLEPYAYWPLDRKMMSRRPEHRAAARKGMS
SIVKLTKKLEGKSASSVLSAKRSKTKKKTRSQK
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atggaggggattgaaatggaactgcctttcccggagaactcgtcagatgacttctgcaat
actgtattatcacaattttgcgattccaacaatgagcaccacgtccacatctgcaccgcc
attggtacaatgtcacaggagctcagagagcagagttttcctcttacgccaattgcttac
ttcggtgctacttgttcctcactccaaaccctatataccgctgcccctgaagggccgcca
tcccatcttattgatgctctttccacgattttgtctctcgttgttcctagaataaaccaa
gctatgttgaggaagaagtatgaatatttatctgatgttatgattcaacttcttggattg
aagactattggtattgaagggattgtttcgtgcttgaagtgtgttgtgcatttgctaatt
gttggagccaaggggaactggtctgatgtcgctcaactttatggtctgtttattgggtat
ataacagatgatcggcaaaaggtgaggaagatgtcacataattgtctacgtgatctcctg
caaaactttcagtcatcatctgtgcttgctcctctattggcacctgctagtgaggcaatc
acaaatctctttgaaaggtcccttcttcttgcaggaggaacaactgtaaatgcctctgaa
agacccaaaggagcacaagaagtcttacacgtgctggatgctctgaaactttgtcttcct
tttatgtcttcaaagtacttgaatagcactttgaagtacttcaaatctttattggaattg
catcagcctcttgttaataggcgcattacagatggtttgaatgctctttgtatccatcca
acagcagaagtatctccagaagtgcttttggacctcttgggttcatttgctgcttcagtt
tctgcaaatgagtcatctgctgatactttgacattcacagctcgcttgcttggcattggg
atgagaaaagtatattcaattaacaggcaattatgtgtggttaagctccctgtggtgttc
aactctcttagtgatgtactgggttctgaacatgaggaagctataagggctgcgctggag
gcactcaagagcttaatacatgaatgcattgatgaaaacttgatcaaacagggtgtggat
aacataattagttcgaatactgatatgaaaaaatctggaccaactatcattgagaaaatc
tgtgccacaattgagagcttgcttacctatcactatgcagcagtctgggacatgtcattt
caagtggtggttgccatgtttgataagctaggttgctattcttctcaccttctgaaggga
acactacagagtttggctgatatggaaaagttgccagatgaagacttccctttccgtaga
cagctgcacgaatgtgttggatcagctgttggtgcaatgggacctgaatcttttcttact
cttcttcctcttaaactggatgcacaagatctatcagaatccaacatctggcttttccca
attctaaagcaaaatattgttggtgcgcatttaagtttctttaccaactcaattttgtcg
atggttgcagctatgaagcagaggtctgcaatgcttgagcgcgagggaaagatatattca
gcgagaactattgatggaattgtgtactcattgtggtcactgttaccctcattttgcaat
taccctgtggacactgctgaaagcttcaaggatctggagaaggtattccgcaaagctcta
catgaagagcctgatgtttgtgggataatatgctccagtttgcagatcctcattcagcag
aacaatagtattttaaaagggaaagtggatttgtctgatactgaaacaagcgtttccaga
gaacgagccattgcacgttacaaccagcaagttgcagataataacttgaacacattgagc
ctttctgctcagaaactgctgcctgttctctacgacgtcttcttgaaatcctctaaagat
actggtggatttttgcagagaacaattggtgtattggcctctattgctgacaaagtgaga
gaaaagagtctcgaccaatccaaaggaaaaagaagggtggtaagagtgctatttacgaaa
atcatgcagaggcttttggaggtgacccaagaagttggggaggcagggaaggacaaaaaa
tcgcattcaatgcagattgatgactcatccagtaaaagttcttcgttggagagggcacag
ttgtttgacctggcagtttcattcttgcctggtttaaatgctcaagaaattggtgtgctg
tttggtgctttaaagcctgctttaaaggacgaggaaggcttgatccagaagaaggcatat
aaagttctctccatgatccttcaggactgtgatgaatttatttcaacgaagaccgaagag
ttgcttaatttgatgattgaaacactacctgcctgtcattttccagccaagcgtcacaga
cttgactgcctatactttttgattgtccatgttacaaaggataaatcagaacagaggagg
cgtgacagtattacttcttttatgactgaaattttgcttgcactcaaagaggctaacaag
aaaacaaggaaccgagcgtatgagattcttgtcaagattggccatgcttgtgccgatgag
gacaaaggtggcagaaaggagaacctgcatcagttttttaatatgattgctgggggtctt
gccggggaaacacctcatatgatcagtgcagcggttaaaggcctagctcgccttgcttat
gaattttcagaccttgtttctgctgcttacagtgtcctaccatcaacatttcttctcctt
aagagagagaacaaagaaataattaaggctaatttagggctgttgaaggtactggtcaca
aaatcgactgccgatggattgcaagcacatttaaagaacatggtagaggcccttcttggt
tggcaaaatagtaccaagaaccatttcaaagccaaggttaagctgcttattgaaatgctt
atcaagaagtgtggattggatgctgtaaaagaggtgatgcctgaagggcatatgaaactc
cttactaacataagaaagatcaaggagcgaagagataggagcctcgcctcgaattctgag
gaaagcaagtcccgtatgacaaaagcaacaacatcaaggctaagcagatggaatcataca
aaaatattttctgagttcgatgatggagaatctgagaatagtgatgcagaatatatggac
acgaaaactactgctggtcgtaggagcaaggctacattagtatcagactccaaagcatct
ttattacggtccaagaaaacacggaaattagccaagagtttgcaggaagatctgtttgat
caattagatgatgagccacttgacttacttgaccagaagaagaccaggtcagctcttaga
gcatctggcaatctcaagaggaagcctgaatcagaagacgaagcagaaatagactctgaa
ggccgtttgattattcacgagggagataagaagcaaaaacgagtcaagccaactactgat
gatttagatgtaagaagcaaagcagggagtcgcttttcagagagctcaaggaattctcag
aaacggaggagaacatctgattcaggatgggcgtacactggaacagagtatgcaagcaag
aaggcaggtggtgatgtcaagaagaaagacaaacttgagccatatgcctactggcccctt
gaccgcaagatgatgagccggaggcctgaacatcgggcagcagcacgaaaaggaatgtca
agcattgtgaagctaacaaagaagcttgaaggcaagagtgcatcatctgtgctgtccgca
aagagatctaagactaaaaagaaaaccagatctcaaaaatag
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