Solanum stenotomum: 125876458
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Entry
125876458 CDS
T08385
Name
(RefSeq) probable E3 ubiquitin-protein ligase ZFP1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125876458
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125876458
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125876458
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf_RING_Vps8_fungal
zf-C3HC4_3
zf_RING_Vps8
zf-RING_UBOX
zf-RING_Vps41
Prok-RING_1
zf-ANAPC11
FAR1_N
zf-RING_10
PHD_NSD
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
125876458
NCBI-ProteinID:
XP_049413601
LinkDB
All DBs
Position
9:924174..930398
Genome browser
AA seq
674 aa
AA seq
DB search
MGERNTPHSNHFMTLGADQRSQAYIYPEPCMTYGSFTPFPHPNVNTTVPAPGSLGNFYAP
HLPGHQEGALIYGMPPANGIQQWHHLTNAGAAFAPPSNYFYPYVAAPAALRTSPVPANHG
LRDRLPVSSTQGSIGNNADNLGRNDPRMDSTRGSSKQKNVAGNSGNLQHHSALAGPSTSA
APVITTANESDVSSNDSVSREHGGSDSAPLLENGTTSATMDLPVPANHGLRDGLPVSGTI
DDSVSREHGGSDSAPLLENGAASATMDSPVLANHGLRDGLPVSGTTDDSVPREHGGSDSA
PLLENGAASATMDLPVLANHGLRDGLPVSGTTDDSVSREHGGSGSAPLLENGVQRSGSRF
ASGPDTVLQNNNNHLLQGNYAGQAYQFPGNPWLNMPFNSSGSAAQSWAWSQAAPLTCPPV
GAGGYVIGAGNMAMRGYQVPSSNGGLTGFMYPPIPQGPPQYHPHLSPNMQTMAGHTMSSY
PQMTASPGRQLQLSSSNMGPLLPSGFRMYRPHQREFMMRGTNGSHHNLRNGVSMLGVPRF
RGVHVVDQHRDMRLDVDRMTYEELLALGERIGNVSIGLSEDIIVANLKTRIFLSTETPSP
LENVASDQDQKTVCVICQADFKDGEKIGILNCGHEYHEECVKKWLGVKNSCAICKSAALS
TEKKDKEVVTTGGG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgggggaaaggaatacgccccacagtaatcactttatgactttgggagcagatcagcgg
agtcaagcgtatatttatccagagccttgtatgacgtatgggagctttacaccttttccg
catccaaacgttaacaccactgtgccagctccaggaagccttggtaatttctatgcgccc
catctaccaggccatcaagagggtgctctaatttatgggatgccaccggccaatgggatt
caacagtggcatcatctcaccaatgctggcgcagcgtttgcaccaccatcaaattacttt
tacccttatgtggcagctccagctgcattgaggacttctccagttccagcaaatcatggg
ttacgtgataggcttccagtctcaagcactcagggaagcatcggaaataatgcagataac
ttaggtaggaacgatcctcgtatggacagtaccagagggtcatctaagcaaaagaatgtt
gcaggcaactctggaaatcttcagcatcattctgctctggcagggcctagtacttccgct
gctcccgtcatcacaacagcaaatgaatctgatgtttcttcgaatgattctgtatcacgc
gagcatggagggagtgactcagcaccactccttgaaaatggtactacatctgcaactatg
gatttgccagttccagcaaatcatgggttacgtgatgggcttccagtctcaggcactata
gatgattctgtgtcacgcgagcatggagggagtgactcagcaccactccttgaaaatggt
gctgcatctgctactatggattcaccagttctagcaaatcatgggttacgtgatgggctt
ccagtctcgggcactacagatgattctgtgccacgcgagcatggagggagtgactcagca
ccactacttgaaaatggtgctgcatctgcaactatggatttgccagttctagcaaatcat
gggttacgcgatgggcttccagtctcaggcactacagatgattctgtatcacgcgagcat
ggagggagtggctcagcaccactccttgaaaatggagtacagagaagtgggagcagattt
gctagtggtccagatactgtattgcaaaataacaataatcatctgcttcaaggaaactat
gcaggccaagcctatcagtttcctggcaatccttggctgaacatgcctttcaatagtagc
ggtagtgcagctcaatcttgggcctggagtcaggctgctcctttaacctgtcctcccgtt
ggtgccggaggctatgtaataggtgctggaaacatggctatgcgaggttatcaagtacct
tccagcaacgggggtttgactggtttcatgtatccacccattcctcaaggaccaccgcag
taccatcctcatctgtcacctaatatgcaaactatggcaggccacacaatgagctcctat
cctcagatgacagcatctccaggcagacaactacaacttagttcatccaatatgggaccc
ttgcttccgtctggctttagaatgtacagacctcatcaaagggaattcatgatgcgtgga
acaaatggtagccaccacaacctccgtaatggagtgtcaatgctgggtgttccaagattt
cgtggagtgcatgttgttgatcagcacagagatatgcgattggacgtggatcgcatgacg
tatgaggagcttcttgcattgggggagcgaattggcaatgtgtcaattggtttgtccgag
gatatcatcgttgccaatttgaaaacgagaatatttttgtctaccgagactcctagccct
ctggaaaatgttgcatctgatcaagaccagaaaactgtctgtgtgatatgccaggctgac
ttcaaggatggggagaagatcggcattctcaattgtggccatgagtaccacgaggaatgc
gtgaagaaatggctgggtgtgaagaacagctgcgcgatctgcaaatctgcagccttgtct
actgagaagaaggacaaggaagtggtgactacaggaggcggctaa
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