KEGG   Solanum stenotomum: 125876717
Entry
125876717         CDS       T08385                                 
Name
(RefSeq) SKP1-like protein 1
  KO
K03094  S-phase kinase-associated protein 1
Organism
sstn  Solanum stenotomum
Pathway
sstn03083  Polycomb repressive complex
sstn04120  Ubiquitin mediated proteolysis
sstn04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    125876717
   04120 Ubiquitin mediated proteolysis
    125876717
  09126 Chromosome
   03083 Polycomb repressive complex
    125876717
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sstn04131]
    125876717
   04121 Ubiquitin system [BR:sstn04121]
    125876717
   03036 Chromosome and associated proteins [BR:sstn03036]
    125876717
Membrane trafficking [BR:sstn04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    125876717
Ubiquitin system [BR:sstn04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     125876717
   Cul7 complex
     125876717
Chromosome and associated proteins [BR:sstn03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     125876717
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     125876717
SSDB
Motif
Pfam: Skp1 Skp1_POZ DUF8267 DarP
Other DBs
NCBI-GeneID: 125876717
NCBI-ProteinID: XP_049413905
LinkDB
Position
1:complement(27845876..27846331)
AA seq 151 aa
MSSKKFITLKTSDGEEFKFDETIVVRSEIIKNIVQDQDCASNVIPLSNVDEKLMMKVIEY
WKKHSDKGVSKNQLKNFDKNFLKVHPSVLIDVLLAAKNLDDKELRDVMGQEVADRITGKT
PKEIREEFGIVNDYTPEEEGEVRRENAWAFE
NT seq 456 nt   +upstreamnt  +downstreamnt
atgtcttcaaaaaagttcataactctcaagactagtgatggcgaggaattcaaattcgat
gagactatagttgtgaggtcagaaatcatcaagaatatagtacaagaccaggattgtgct
tctaatgtcatccccttgtctaatgttgatgaaaaactaatgatgaaagtgattgagtat
tggaagaaacactcggacaaaggcgtttcgaaaaatcaattaaagaattttgacaagaat
ttcttgaaggttcacccatctgtattaattgatgttcttttagctgctaaaaatcttgat
gataaggaattgagggatgtgatgggccaagaagttgctgataggatcacagggaaaaca
ccaaaggaaatacgtgaagaatttggtatcgtgaatgattatactccagaggaagagggg
gaggtccgtagagagaatgcttgggcttttgaatga

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