Solanum stenotomum: 125876783
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Entry
125876783 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125876783
KO
K15082
DNA repair protein RAD7
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sstn03400
]
125876783
DNA repair and recombination proteins [BR:
sstn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
125876783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
LRR_RPS2
LRR_At1g61320_AtMIF1
SAM_Ste50p
Synuclein
Motif
Other DBs
NCBI-GeneID:
125876783
NCBI-ProteinID:
XP_049413990
LinkDB
All DBs
Position
9:complement(16872387..16879473)
Genome browser
AA seq
904 aa
AA seq
DB search
MTLLRSREVTPAASKAKVSSKTLENHVLEPVTPSKSLETSVQPLCVVTPTSPSLASGDIP
PVARRRSLRLASKNGLSDVGEILNNEGKSKDFEIDNGDTGNSLKSDVGIESADLDEGDQD
LGVLYSEAVDEIGMNESDDVGNLVCSEGRIECVKEGKGDKNTSMEVQGEGNTKFLSLRSG
KKISKRAVEECSGGAVGDAGSINQNDCDEKLSHGKLSEGMSNSCGSDGSSNKLQTSSVEP
SSVKRRRFSREEKSKGIVSEQGLPVVHSVNLESEVAFGMSIENTVPQSACLPETIDLSVQ
GDGLAATLQNRDSKTRRISREEKGKQVMAGDDLCHGVDTLEGKSKHGAEKLVDEIVSRAI
NLTSQDGEQVADADGSATATRRVHRERFRDIARRNASRFAHFSSQAEQETDVTDEAAEEF
PQEVAETEEIEDWPGPFSTAMKIIRDREMNIKHQQQSKSEKSKIEVVWVPKTDQQCQSRK
LVVPSLRDLCMDILVKNADAITSLDGLPDALRHKICQSLCDSREMTYQFFQLLISGSPTE
IRIRDCSWLNEENFTQSFKGCDTNNFESFKGCDTNNLVVLQLDQCGRCMPDYILLVTLAR
RPNNLPALTTLSLKGACRLSDVGLEAIISAAPNLRSMNLSQCSLLTCDGISCLSNSLGSV
LRELYLDNCEAIHPMLILPALLKLEHLEVLSVAGIQTVCDAFIKEFVTNRGQSLREIILK
GCMELTDRSLKDISQNCPRLRAIDLSDLCKLTDSAIEHLATGCREVDNLKLCRNPFSDEA
VAAYVETSGGSLKELSLNRVKKVSHNTAMSLVKCSKNLISLDLSWCRNLTNEALGLIVDS
CLSLEVLKLFGCSQVTSIFLDGHSNPQVKIIGLKMTPILQHIEAPDSLQQGPLRYSAVPW
HSDR
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgacgctattgaggtctcgtgaggtgactccggcggcatctaaggctaaagtttcttct
aaaaccctagaaaatcatgtattggaaccggtaactccgtcgaaatctcttgagacttct
gttcagcctttatgtgttgtgactcctacttctccttctttggctagtggtgacattcct
cctgttgctagaaggaggagtttgagattggcttctaaaaatggtttgagtgatgttggt
gaaattttgaataatgaagggaagagtaaggattttgaaattgataatggggatactggc
aatagtttaaagagtgacgttggtatagaaagtgcagatttggatgaaggtgatcaagat
ttgggggttttatatagtgaagcagttgatgaaataggtatgaatgaatctgatgatgta
ggaaatttagtctgcagtgagggaagaattgaatgtgttaaagaggggaaaggggataaa
aatacaagtatggaagtacagggtgaagggaatactaagtttttaagtttgcggtcgggc
aagaagatctctaagagagctgttgaagaatgcagtggtggcgctgttggtgatgctgga
agtattaatcagaatgattgtgatgagaagttgtctcatggaaagctaagtgaaggaatg
tcaaacagttgcggttcagatggctccagcaataagttacagacaagttcagttgagcct
tctagtgttaagaggaggagattcagcagagaagagaaatctaaaggtatagtttctgaa
cagggtttgccagtggttcattcagtgaatttggaatcagaggtagcatttgggatgtca
attgagaacacagtacctcagtctgcctgtttgcccgaaaccatagatctgtctgttcag
ggtgatggactagctgccactttgcaaaatcgtgattcaaagacaagaaggattagtaga
gaggaaaagggaaaacaagttatggctggcgatgatttgtgtcatggtgttgatacattg
gaaggaaaatccaagcatggggcagagaaactcgttgatgaaattgtttcaagagcaatt
aatttgacaagtcaagatggagagcaagttgcagatgccgatggcagtgcaactgctaca
agaagagttcatagagaaaggtttagggatattgctagacgaaatgcgtccaggtttgct
catttctcttcccaagccgaacaggagaccgatgtaactgatgaggctgctgaggaattt
ccacaggaggtagcggaaactgaagaaatagaagactggcccggtcctttttcaactgct
atgaagattattagagatcgtgaaatgaacatcaagcatcagcagcagagtaaatctgag
aaaagtaagattgaagtggtatgggtccccaaaacggaccagcagtgccaatctagaaag
ctggttgttccctcattacgtgacttatgcatggacattttagtgaagaatgctgatgca
atcacttcacttgatggtttacctgatgcacttaggcacaagatttgccagtcactgtgt
gactctcgggaaatgacatatcaattttttcaacttcttatcagtggatctcctacagag
atacgcataagggattgttcatggttgaatgaggagaatttcacacagagctttaaagga
tgcgacaccaacaactttgagagctttaaaggatgcgacaccaacaacttggtggtgctt
caactggatcagtgtggtcgctgtatgccagattatatcctattggttacattagctcgt
cgtccaaacaatctccctgcattgacgaccttatccttgaaaggtgcgtgtcgtctttcg
gatgttgggctggaggcgatcatctctgcagcacctaatttaaggtcaatgaatcttagc
cagtgctctttgctgacatgtgatggaattagctgtttatctaattcattgggatcagtt
ctgagagagttatatctagacaattgcgaagcaatacatcccatgcttattctgccagca
ttgctaaagctagaacatttggaagttctatcagtagctggaatccagactgtgtgtgat
gcttttattaaagaatttgtcactaatcgaggtcagagtctgagagagattattctgaaa
ggatgcatggaattgactgatcgttctctgaaagatatttcacaaaactgtcccagattg
cgcgctatagacctgagcgacttgtgtaaattgaccgactctgcaattgaacatcttgcc
actggttgtagagaagttgacaatctaaaactctgtcgcaatccattcagtgatgaagct
gttgctgcttatgtggaaactagtgggggatctttgaaggaactatctctcaatcgtgtc
aaaaaggtttcacacaacactgctatgtctctagtcaaatgttcaaaaaatttgattagt
ctggatttgtcttggtgtcgcaacttgacgaacgaagccctgggattgattgttgatagc
tgcttatcgttggaagtactaaaattgtttggctgttctcaggttactagtatttttctg
gatgggcactcaaatccccaagttaagatcattggattgaagatgactccgatactacag
cacattgaggcaccagattctctgcagcaggggccgctacgatattcagcagtgccatgg
cactctgacagatga
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