Solanum stenotomum: 125876796
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Entry
125876796 CDS
T08385
Name
(RefSeq) oligouridylate-binding protein 1-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125876796
03041 Spliceosome [BR:
sstn03041
]
125876796
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
125876796
Spliceosome [BR:
sstn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125876796
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
125876796
NCBI-ProteinID:
XP_049414009
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All DBs
Position
9:15075108..15452832
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AA seq
410 aa
AA seq
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MMQQRLKQQQALMQQSLYHPALLAPPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP
LLQEVFSSTGPLEGCKLIKKEKSSYGFVDYFDRRSATLAIVTLNGRNLFGQPIKVNWAYT
SAQREDTSSHFNIFVGDLSPEVTDATLYACFSVYPSCSDAKVMWDQKSGRSRGFGFVSFR
SQQEAQSAINDLNGKWLGSRQIRCNWATKGAGGIDDNKSSDAKSVVELTSGTSDDGHDKA
NEDAPENSPQYTTVYVGNLSPEVTLVDLHRHFHGLGAGVIEDVRIQRDKGFGFVRYSTNA
EAAQAIQLGNAQFLFGKPIKCSWGSKPTLPGASSTPLPPPAVGHVPGISVTDLVAYERQL
ALARMGGSQALMHSQALMHSQGQRIGVASQAIYDGGYGGIAATTQPPLYY
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaacagaggctgaagcagcaacaagcattgatgcagcaatccctttatcatcct
gctcttcttgcacccccacagatagagcctatcttgagtggaaatttgcctcctggattt
gattcaagtacttgccgcagtgtgtacgttggaaacatccacccccaagtaacggaacca
cttcttcaagaggtcttctcaagtactggcccccttgagggatgcaagctcataaaaaaa
gagaagtcatcgtatggatttgtcgactactttgatcgccgatcagcgacccttgctatt
gtgactcttaatggaagaaatttgtttggacagcctataaaagttaactgggcatatact
agtgctcagagagaggatacctcaagtcactttaacatttttgtgggtgatctcagtcca
gaggttacagatgccacattgtatgcatgcttttcagtctaccctagctgctcagatgca
aaggttatgtgggatcaaaaatcaggccgttcaaggggatttggattcgtttccttccgt
agtcagcaggaggcgcaaagtgcaataaatgacttgaatggtaagtggttaggaagcaga
caaatccgctgcaactgggcaacaaaaggcgctggaggaattgatgacaataagagttca
gatgcgaaaagtgttgttgagttgacaagtggaacatcagatgatggtcatgacaaggcc
aatgaagatgctccagaaaatagtccccagtatacaactgtttatgttggcaacctttct
cctgaagtcactttagttgacctccatcgtcattttcatggtcttggagctggtgttatt
gaagatgtccgtattcaacgggacaaaggttttggttttgtaagatacagcaccaatgct
gaagctgctcaagctattcagttgggaaatgcccaattcctctttggtaaacctattaag
tgctcatggggaagcaagcctactctgccaggagccagttctacccctcttcctcctcca
gctgtgggacacgtccctggtatttcagtgactgatcttgtagcctatgagcggcagctt
gctttggctaggatgggcggttcacaggctctcatgcattctcaggctctaatgcattcc
caaggtcagcgaattggtgttgctagtcaagcgatttatgatggtggttatggaggtatt
gctgctacaactcaaccaccattgtactactag
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