Solanum stenotomum: 125876949
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Entry
125876949 CDS
T08385
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00061
Fatty acid biosynthesis
sstn00071
Fatty acid degradation
sstn01100
Metabolic pathways
sstn01212
Fatty acid metabolism
sstn04146
Peroxisome
Module
sstn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
125876949
00071 Fatty acid degradation
125876949
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125876949
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sstn01004
]
125876949
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sstn04147
]
125876949
Enzymes [BR:
sstn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
125876949
Lipid biosynthesis proteins [BR:
sstn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
125876949
Exosome [BR:
sstn04147
]
Exosomal proteins
Exosomal proteins of breast milk
125876949
Exosomal proteins of breast cancer cells
125876949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Apo-VLDL-II
Motif
Other DBs
NCBI-GeneID:
125876949
NCBI-ProteinID:
XP_049414202
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Position
1:complement(11271358..11284805)
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AA seq
696 aa
AA seq
DB search
MESSAERRLKAIQSHLVPATDDVSRSLIRSNPTAGEFLLGQGFSVVLPEKLQTGKWNVYR
SARSPLKLVTRFPDHPEIGTLHDNFEHAVQTFQDYKYLGSRIRVDGTVGEYKWMTYGEAG
TARTAIGSGLHYYGLQPGARVGLYFINSPEWMIVDHACAAYSYTSVPLYDTLGPDAVKYI
VNHADVQAIICVPTTLNTLLTFLSEIPSVRLIVVVGGIDEHLPSLPSTTGMKLLSYTRLL
SQGRSSMQPFCPPKPEDIATICYTSGTTGTPKGVVLSHANLIASVAGMTLAIKFYPSDIY
ISYLPLAHIYERANQITSVYYGVAVGFYQGDNLKLMDDLVTLRPTIFSSVPRLFNRIYAG
IANAVQTSGVLKQRLFNAAYNSKKQAVMNGRKPSPMWDRLVFNKIKDKLGGRVRLMTSGA
SPLSPDVLEFLRVCFGCLVMEGYGMTETSCVISSMDETDNLTGHVGSPNPACEIKLVDVP
EMSYTSEDQPHPRGEICVRGPIVFEGYYKDEVQTKEVVDDDGWLHTGDIGLWLPGGRLKI
IDRKKNIFKLAQGEYIAPEKIENVYAKCKFIAQCFVYGDSFNSSLVAIVCVEPDVLKEWA
SSEGIKYEDLGQLCNDPRVRAAVLTEMDAVGREAQLRGFEFAKAVTLVIEPFTIENGLLT
PTFKVKRPQAKAYFAKAISDMYKELSTSDPASQKSL
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggaatcatcggcagagcgacgcctgaaagctattcaaagccatcttgttccggccacc
gatgacgtgtctcgctcattgatccgttcaaacccaactgccggcgaatttttactaggt
caggggttcagcgtagttcttcctgagaaattgcagacaggaaaatggaatgtatacaga
tctgcacgatctcctcttaagcttgttactagatttcccgatcatcctgaaattgggaca
ctacacgataactttgaacatgcggttcaaacctttcaggattacaaatatttgggttca
cgcattcgggtagatggaactgttggagagtacaaatggatgacatatggagaggcaggg
actgctcggactgcaattggttctggacttcactattatggattacaaccgggtgctcgt
gtgggactttacttcataaatagccctgagtggatgattgtagaccatgcttgcgcggca
tattcatatacttcagtccctctatatgacactcttggtcctgacgctgttaaatatatt
gtcaatcatgctgatgtacaggccattatttgtgtgccaactacgttgaacactttgttg
acctttttatcagagattccatctgtacgtttgattgtggtagtgggtgggatagatgaa
catctcccatctcttccatctacaacgggaatgaagctcttatcatatacaaggcttctg
agtcagggccgcagcagtatgcaacccttttgccctcccaagcctgaagatattgctacc
atatgctatacaagtggtactacggggacaccaaagggtgtcgtattatcccatgcaaac
ctgatagcaagtgttgcaggcatgacccttgcaatcaagttttatccatctgacatatac
atatcctatcttcccctggcgcacatctatgaacgtgccaaccaaattacatcagtatat
tatggtgttgctgttggattctaccagggggacaatctgaaattgatggatgatttggtg
acacttagacctacaatatttagcagtgttcctcgtctcttcaacaggatatatgctggg
atcgcaaatgccgtacaaacttctggtgtactgaagcagagactgtttaatgctgcctac
aactccaagaagcaagctgtgatgaacggtagaaagccatcaccaatgtgggataggttg
gtgttcaacaaaataaaggacaaactgggcggacgagttcgtcttatgacctcaggtgcc
tcaccattgtcccctgacgtgttggagttcttgagagtatgttttggctgcctagtaatg
gaagggtatggcatgactgagacttcatgtgtcataagctcaatggacgagactgataac
ttaactggtcatgttggttctccgaatccagcatgtgagataaagctcgtggatgtcccc
gaaatgagttacacatcagaggatcagcctcatcctcgtggagagatttgtgttagaggt
cctattgtttttgaaggctattacaaagatgaagtgcagacgaaggaggtagttgatgat
gatggttggctgcatactggtgatattggattatggttacctggaggccgcttgaagatt
attgacaggaagaagaatatcttcaagttggcacagggcgaatacatagctcctgagaaa
attgagaatgtttatgctaaatgcaaatttattgcacaatgcttcgtctatggtgatagc
tttaattcctctttagtagcaatagtttgtgtagagccagatgtcttgaaggaatgggca
tcatctgagggaatcaagtatgaagatttgggacaactatgcaatgatccaagagtaagg
gctgctgttcttactgagatggatgcagtcggaagggaagctcagttgagaggtttcgaa
tttgcaaaagctgtaacattggttattgagcctttcacaatcgaaaatggccttctcact
cccacgttcaaggtcaagaggcctcaggcgaaggcttatttcgccaaagcaatatctgac
atgtataaggagctctctacatcagatccagcatcccagaaatcactatga
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