Solanum stenotomum: 125876995
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Entry
125876995 CDS
T08385
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3-like
KO
K03265
peptide chain release factor subunit 1
Organism
sstn
Solanum stenotomum
Pathway
sstn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125876995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125876995
03012 Translation factors [BR:
sstn03012
]
125876995
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
125876995
Translation factors [BR:
sstn03012
]
Eukaryotic type
Release factors
125876995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Motif
Other DBs
NCBI-GeneID:
125876995
NCBI-ProteinID:
XP_049414256
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Position
9:complement(53208779..53211730)
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AA seq
437 aa
AA seq
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MADSHDNDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIITEDGKEKKVTIDFEPFRPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEVLANVKFIQEKKLIGKYFEEISQDTG
KYVFGIDDTLKVLEMGAIETLIVWENLDINRYVLKNNTSGETIIKHLNKEQDTVQSNFRD
PDTNAELEVQDKLSLLEWFANEYRRFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDV
RAFDELSDDGEVYEDSE
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggctgacagtcatgataatgataagaatatcgagatatggaagatcaagaaacttata
aaggcacttgaagctgctcgaggcaatggtaccagcatgatttctctaatcatgcctcca
cgggatcaagtatctagggtcactaagatgcttggagatgagttcggaactgcatcaaac
atcaaaagtagagtgaatcgtcaatctgtgctgggtgcaatcacatctgctcagcagaga
cttaaactctataacaaggttcccccaaatgggcttgtgctttataccggaacaatcata
actgaagatgggaaagagaagaaggttacaattgattttgagcccttcaggcccattaat
gcatctctatatctttgtgataacaagttccacacagaagccttgaatgagcttttggaa
tccgatgacaagttcgggtttattgtgatggatgggaacgggacactttttgggacattg
agtggcaataccagggaggtccttcacaagtttagtgttgatctgcccaaaaaacatgga
agaggaggtcagtctgctctgcgttttgctcgtcttcgaatggaaaaacgtcacaactat
gtgaggaaaacagccgagcttgcaacccagttctatattaatcctgccaccagccagccc
aacgtttcaggtctgatactagctggatcagctgactttaagacggagcttagccagtct
gatatgtttgatcctcgtcttcaggcaaagattttaaatgtggttgatgtttcttatgga
ggggaaaatggtttcaaccaagcaattgagctgtctgctgaggtcttggccaatgtgaaa
tttatacaagagaagaagttgataggcaaatattttgaggagatcagtcaggacaccggg
aaatatgtttttgggattgatgataccttgaaagttctggaaatgggtgctattgagacc
cttattgtgtgggaaaatctggacattaataggtatgtgctaaaaaataacacttccgga
gaaacaatcatcaaacacttgaacaaggagcaagacactgtccaaagtaacttccgtgat
cctgatacaaatgctgaattagaagttcaggataaattgtcactacttgagtggtttgcg
aatgagtacaggagatttggttgtagtttggagtttgttaccaacaaatcacaggaagga
tctcagttttgccgtggttttggtggcattggaggaattctccgctaccagcttgatgtt
agagcttttgatgaactttctgatgatggtgaagtttacgaagattctgaatag
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