Solanum stenotomum: 125877223
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Entry
125877223 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125877223
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
sstn
Solanum stenotomum
Pathway
sstn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125877223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sstn03021
]
125877223
Transcription machinery [BR:
sstn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
125877223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta_N
Motif
Other DBs
NCBI-GeneID:
125877223
NCBI-ProteinID:
XP_049414529
LinkDB
All DBs
Position
9:27549845..27552134
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AA seq
187 aa
AA seq
DB search
MEEDHGNSNSSITVDTTKWDRSVWLMKCPLVVSKSWQSQAAASSSSSDSPQVAKVIVSVD
PLRSDDSSALQFTMEMGGNDVGNMPKSYSLNMFQDFVPMCVLSETGQGRVTMEGKVEHKF
DMTPHTRNMEEYRKMCRERTNKSMIKNRQIQVIDNDRGVNMRPMPGMIGMIASSSKVYEP
SSIPLSM
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagatcatggaaacagcaacagtagtataacagtggatacaacaaaatgggac
agatcagtgtggttaatgaagtgtcctttagttgtctccaaatcatggcagtctcaagcc
gcagcttcatcttcctcctcagattccccgcaagttgctaaagttattgtctctgttgat
cctcttcgttccgatgactcatctgctctacaattcactatggagatgggtggaaatgac
gttgggaatatgccgaaaagttactccttgaacatgttccaagacttcgtcccaatgtgt
gtgctctcagagacaggtcaaggaagagttaccatggaaggaaaggttgaacataagttt
gatatgacacctcacactcgtaacatggaggagtacaggaaaatgtgtcgtgaaaggaca
aataagtcaatgatcaagaacagacaaatacaggtcattgacaatgatcgtggagtcaat
atgaggcccatgcctgggatgattggcatgattgcatcaagttctaaggtatacgaacca
tcatctattcctctaagcatgtag
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