Solanum stenotomum: 125877227
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Entry
125877227 CDS
T08385
Name
(RefSeq) membrin-11-like
KO
K08496
golgi SNAP receptor complex member 2
Organism
sstn
Solanum stenotomum
Pathway
sstn04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
125877227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125877227
Membrane trafficking [BR:
sstn04131
]
SNARE
SNAP-25[N] (Qb)
Bos1 / Membrin
125877227
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
Sec20
ANC1_spectrin
TMCO5
DUF5927
Myb_DNA-bind_4
VirC1
SpoVR
Motif
Other DBs
NCBI-GeneID:
125877227
NCBI-ProteinID:
XP_049414530
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All DBs
Position
9:complement(10439563..10443220)
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AA seq
249 aa
AA seq
DB search
MATAVGIGEGNSGAGGGTLSELYQSSRRLLLKSRDGLERLERFEYTSSSSSSMLPSSSSS
AVMADPSEQPFDAVRQDIAQIQSLCSKMELLWRSISAKSQRDLWKRKVEQVAEEADSLKA
SLDKYNLRHQRRMQEARERAELIGRSNGDSSHVLRIFDDEAQAMQSARNSSRMMEETLAT
GVAILSKYSEQRDRLKRAQRKALDVLNTLGLSNSVMRLIEKRNRVDRWIKYAGMVLTIVI
LFFIWRWTR
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggcggttgggatcggggaaggaaattccggtgccggtggtggaaccttatcg
gaactttaccaaagctcgagacggctcttactcaagtctcgagatggtttggagaggctc
gagcgtttcgagtacacttcgtcgtcttcttcttccatgctaccgtcatcatcttcgagt
gctgtcatggccgatccgtcggaacaaccgtttgatgcagtaagacaagatatcgctcag
atccagtctctttgctctaagatggaacttctctggcgatccatatctgccaaatcccag
cgtgatctctggaaaagaaaagtggaacaagtggctgaagaagctgactctttgaaagct
agtctggataaatataatttaagacatcagcgacgtatgcaagaagcccgggagagagca
gaactgattgggagaagtaacggtgattcatcccatgttctgaggatttttgatgacgaa
gcacaggcgatgcaatctgctcgtaattcatccagaatgatggaagaaaccttggcaaca
ggtgtggccattctatccaaatatagtgagcaaagggatcgcttgaagagagctcaacgt
aaagcactagacgtgctcaacactttggggctttcaaattctgtaatgagactcatcgag
aagaggaatcgcgttgatagatggatcaagtatgctggaatggtcttaacaatcgtgatt
ctgtttttcatttggaggtggacaagatga
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