Solanum stenotomum: 125877230
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Entry
125877230 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125877230
KO
K12817
pre-mRNA-splicing factor 18
Organism
sstn
Solanum stenotomum
Pathway
sstn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125877230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sstn03041
]
125877230
Spliceosome [BR:
sstn03041
]
Complex C
Other components
Step II factors
125877230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
Motif
Other DBs
NCBI-GeneID:
125877230
NCBI-ProteinID:
XP_049414534
LinkDB
All DBs
Position
9:complement(7906323..7907453)
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AA seq
376 aa
AA seq
DB search
MDAVKQIIEERKSVTQQVGRRKIFNKFEMEQKLLQTRCQEEKREAEAKNLRKTQLQQQQK
NDKSYSSKLSNSKTDIQCLIKLESSSSASLPQQEVIRRLRFLKHPVTLFGEDEDARFDRL
NVVLKAGLFEVEDSDMTEGQTNNFLRDILELKKSRMLKRKATDQDKDRDDEDLKRMKTNF
EDLCDEDKILVFYKKLLNEWNQELDKMSPEAKNQKMVATFMQCARDLNPLFNLCRKRLLN
DDIRQALVVMVECCMNREYSAAMDQYLNKIAIGNAPWPIGVTMVGIHERSAREKIHANSV
AHVMNDETTRKLLYSVKRLVTFCQQRYPTMPSKSVEFNSLANGSDLHPLRAQESTPLTSE
ERLPIMPMPAQGASIV
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagtgaaacagataatagaggagcggaaaagtgtaacccaacaggttggtcgc
cggaaaattttcaataaatttgaaatggaacagaaactactacaaacacgttgtcaagag
gaaaagcgtgaagctgaagcaaaaaacctacgtaaaacgcaattacaacagcaacagaag
aatgataaatcttattcatcaaaattatcgaattccaaaactgacatccaatgcctgatc
aaactggaatcttcttcatcagcctcccttccacaacaagaagttatccgccgtcttagg
tttctgaaacatccggtgactttattcggagaagatgaagatgcaaggtttgataggttg
aatgttgtgttgaaagctggattgtttgaagttgaggatagtgatatgactgaagggcaa
acgaataactttttgagagatattttggagttgaagaagtcacggatgttgaagcggaag
gcgacagatcaggataaagatcgtgatgacgaagatttgaagaggatgaaaactaatttt
gaggatttgtgtgatgaggataagattttggtgttctacaaaaagttgttgaatgagtgg
aatcaggagctggataagatgagtcctgaggctaaaaaccagaaaatggtggctactttt
atgcagtgtgctagggatttgaatccgttatttaatttgtgccggaaaaggttacttaat
gatgacattaggcaagcattagttgtgatggttgaatgttgtatgaatagagaatatagt
gctgcaatggatcaatatcttaataagatagcaattggtaatgcaccttggcctattggt
gttactatggttggtattcatgaacgatcagcgcgtgagaagattcacgcaaatagtgtt
gctcatgtcatgaatgatgagacaactaggaagcttctatattcagttaaaagactggtg
acattctgccaacaacgctacccaacaatgccatccaaatctgtggagttcaatagcctt
gcaaatggcagtgacttacaccctctgcgtgcacaagaatcaactcctctaacctcagaa
gaaaggcttccaataatgcctatgcctgcacaaggggcgtctatagtttaa
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