Solanum stenotomum: 125877320
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Entry
125877320 CDS
T08385
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00040
Pentose and glucuronate interconversions
sstn01100
Metabolic pathways
Module
sstn_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125877320
Enzymes [BR:
sstn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
125877320
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
125877320
NCBI-ProteinID:
XP_049414608
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Position
9:complement(17030185..17032075)
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AA seq
393 aa
AA seq
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MASKSCLEIAFIFGLVLVCTNAEGKVFNVLSYGAKADGVTDNSKAFLKAWADACKWNGQA
KLLIPLGVYMVNVVNFIGPCEKSTLTFEIKGIIKAPKDPKLFCNSSWISFQYINDLKIKG
GGTLDGQGSFTWGKHQCSSMTLGFNFVNNTVVRDIHSINSKNIHFKVFACENMTFSHVNI
TAPRDSPNTDGIHISHSTNIHVLDSYIGTGDDCIAMIAGSNNINISGVTCGPGHGISIGS
LGNSPNEVVKDIHVKNCTLIATQNGLRIKTWASSNVGNITNITFEDIIMEKVRNPIFIDQ
HYCPIHHCSKQPSSVQIKDVTFNNIRGSSSSRRAVILDCSALFSCEKINLNDINLAYHGR
HGHAIAFCAHAKGKATGKELPPSCLKESLNSST
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaaatcatgtttagaaatagcttttatatttggccttgttcttgtgtgcact
aatgctgagggaaaggtcttcaatgtcctttcatatggtgctaaagcagatggagtgaca
gataatagtaaggcatttttaaaagcttgggcggatgcatgcaaatggaatggacaagcc
aaattgttgatacctttaggtgtatacatggtaaatgttgtaaattttattgggccatgc
gaaaaatcgactttgaccttcgaaatcaaaggaattattaaagctccaaaggatccaaaa
ttattttgcaattcgtcttggatttcttttcaatatatcaatgacttaaaaattaaagga
ggtggaacgttagatggacaaggatcttttacttggggaaagcatcaatgttcatcaatg
acacttggattcaattttgtcaataatacggttgtgcgtgacatacattcaatcaatagc
aagaacatacatttcaaggtctttgcttgtgaaaacatgacatttagtcatgttaacata
acagcaccacgcgatagccctaacactgacggaattcacattagccactccaccaacatt
catgtattggattcttacattggcactggagatgattgtatagctatgatcgcgggaagc
aataatatcaacatttcaggagtcacttgtggccctggccatggaataagcatcggtagc
ttagggaattcgccaaatgaagttgttaaggacatacatgtcaaaaattgcactcttatc
gctactcaaaatgggttgagaattaagacttgggcatcatcgaatgttggtaacattacc
aatataacttttgaagatattatcatggaaaaggttcgaaatcctatatttattgaccaa
cattattgcccaatacatcattgcagcaaacagccaagttcagtacaaatcaaggacgtg
acattcaataacataaggggaagttcaagttcgcggagagcagttattttggattgcagt
gcattattttcttgcgaaaaaatcaaccttaatgatatcaacttagcctaccatggccgt
catggacatgcgattgcattttgcgctcacgctaaagggaaagccaccggcaaggagttg
cctccaagttgtttaaaggagtctcttaattcatcaacttag
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