Solanum stenotomum: 125877742
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Entry
125877742 CDS
T08385
Name
(RefSeq) translation initiation factor IF-2, chloroplastic
KO
K02519
translation initiation factor IF-2
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sstn03012
]
125877742
03029 Mitochondrial biogenesis [BR:
sstn03029
]
125877742
Translation factors [BR:
sstn03012
]
Eukaryotic type
Initiation factors
MTIFs
125877742
Prokaryotic type
125877742
Mitochondrial biogenesis [BR:
sstn03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
125877742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
EF-G_D2
MMR_HSR1
GTP_EFTU_D2
Ras
IF2_N
RsgA_GTPase
Roc
Arf
SRPRB
Motif
Other DBs
NCBI-GeneID:
125877742
NCBI-ProteinID:
XP_049414931
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All DBs
Position
9:complement(2294599..2303529)
Genome browser
AA seq
1010 aa
AA seq
DB search
MSSMASLVSLGSVCGCSSGQFEGSFSLVRRVSFSKNFGSVNRIWGGKRWRYVSVCRYSVT
TDFIADQGTSISLDSSSSSNKDDDADLMLKPAPKPQLKPGPRPGPVLGNGPVLSSDSDGE
KRNPIEEERSKVIESLGEALETVEKLETNRKANVSVNKASAIARTTQRNSKPVDSDDSSN
RKSKTLKSVWKKGNPIAAVQKVVKLPPKQEPMTDGGKNSESQSVAPIKPPQPPQKVQPQL
LARPSVAPPPPVIKKPVILKDVGAAAKSSPSDGIESVGKTKELESAGKTKERKTILVDKF
ASKKSAVDPMIAQAVLAPPKFGKNAPPGKFREEFRKRSGVSGGQRRRMVDDGIPDEEASE
LDVSLPGRARKGRKWTKASRKAARLKAAQESAPVKVEILEVGEEGMPTEELAYNLATSEG
EILGLLYSKGIKPDGVQTLSNDMVKMVCKEYEVEVIDAASVKVEDMAKKKEIFDEDDLDK
LEDRPPVITIMGHVDHGKTTLLDHIRKTKVAASEAGGITQGIGAYKVQVPIDTKSQICVF
LDTPGHEAFGAMRARGARVTDIAIIVVAADDGIRPQTNEAIAHAKAAGVPIVIAINKVDK
DGANPDRVMQELSTMGLMPEDWGGDVPMVKISALKGENIDDLLETVMLVAELQELKANPQ
RNAKGTVIEAGLDKSKGPVATFIVQNGTLKGGDVVVCGGAYGKVRALFDDKGKRVDEAGP
SMPVQVIGLNNVPLAGDEFEVVESLDIAREKAEERAESLRSERLSEKAGDGKITLSSFAS
AVSGGTGLDLHQLNIILKVDLQGSIEAVKQALQVLPQDNVTLKFLLQATGDVSASDVDLA
VASKAIIFGFNVRTPGSVKSYADNKGVEIRLYKVIYDLIDDVRKAMEGLLESVEEQVPIG
SAEVRAVFSSGSGRVAGCMVTEGKVVEECGIRVTRKGKVVHVGVVESLRRVKEAVKEVNA
GLECGIGVEDFDDFEVGDTLEAFNSVQKRRTLEEASASMAAALEEVGRGL
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtatggcttccctggtgagtttggggagtgtttgtggatgttcttctggacag
tttgaagggtcattctcactagttaggagagtttctttttcgaagaactttggaagcgta
aatagaatttggggtgggaaaagatggcgttatgtttcggtttgtagatattcggtcaca
acggatttcattgctgatcaggggacatcaatatctcttgattcctcatccagtagtaat
aaggacgatgatgctgatcttatgcttaagccggccccgaaaccacaattgaaacctggc
cctagacctggccctgttttagggaatggaccagtccttagctctgattctgatggtgaa
aaaagaaatcctattgaagaagagagaagcaaggtgattgagtcacttggagaggcatta
gagacagtggagaagctagaaactaacagaaaagcaaatgtgtcggttaacaaggcgtct
gccattgcacgtactacacaaagaaatagcaagccagttgattctgatgattcttccaac
aggaagtccaaaactttgaagagtgtctggaaaaaagggaatccgattgctgctgtacaa
aaagttgtaaaactaccccctaaacaggaaccaatgactgatggtggaaagaatagtgaa
tcccaaagtgttgctcctataaaaccccctcagccaccccagaaggttcaaccacagtta
ctagcaagaccgtctgtagctcctcctcctcctgttatcaagaaaccagtgatattgaag
gatgttggtgctgcggcaaagtcctcaccctctgatggaattgaatctgttggaaagacc
aaagaacttgaatcagctggaaagaccaaagaacgcaagacaatattggttgacaaattt
gcctccaagaaatcagctgttgatcctatgattgctcaagctgttttagcccctcctaaa
tttggaaagaacgcacctcctgggaaattcagggaggagttccgtaaaaggagtggtgta
tctggaggacaacgcaggcgtatggttgatgatgggattcctgacgaggaagcatcagag
cttgatgtttctcttcctggtagagcaaggaagggaagaaagtggactaaggcaagtcgc
aaggcagcccgacttaaggctgctcaagagtctgcacctgtcaaagtagaaattctagag
gttggtgaagaaggcatgccgactgaggagttggcctacaacctagctactagcgaaggt
gaaatccttggtcttctatactcaaaaggaatcaagcctgatggtgtgcaaactctcagc
aatgacatggtgaagatggtttgcaaagaatatgaagtggaggttatcgatgctgcctcg
gttaaagtggaagatatggcaaaaaagaaggaaattttcgatgaagatgacttagacaaa
ctagaagatagacctcctgtaataactataatgggtcatgttgatcacggaaagactact
ctcttggaccatatacgcaagaccaaggtggcggcatctgaagctggtggaattactcaa
ggaattggggcatataaggtgcaagtgcctattgacaccaagtcccagatatgtgttttt
cttgatacacctggacacgaggcttttggggcaatgagagctcgtggagcaagagtaaca
gacattgctatcattgtagtagctgctgatgatggaattcggcctcagacaaatgaggct
atagcacatgccaaggctgccggagttccaattgtgattgccataaataaggttgataag
gatggagcaaatcccgaccgagtcatgcaagaactttccaccatgggtttgatgccggaa
gattggggcggtgacgttccaatggttaagatcagtgctcttaaaggagagaatatagat
gatttgctggaaacggtcatgcttgttgcggagttgcaagagttgaaggctaatcctcaa
agaaatgccaaggggacggtgattgaggcaggtctcgataaatctaaaggacctgtagca
acgttcattgtgcagaatggtacactgaaaggaggagatgtagtagtttgtggtggagct
tatggaaaggtgcgggctctgtttgatgataagggaaaacgtgttgatgaagccggaccc
tccatgcctgtgcaggtgattggactgaacaatgttccattggctggtgacgagtttgag
gttgttgagtcccttgatattgctcgtgaaaaggctgaagaacgagcagagtccttgcgg
agtgagcgtttatcagaaaaggccggagatgggaaaattacactctcttcttttgcttct
gctgtttcaggaggaactggtctagacttgcaccaactaaatattattctgaaagttgat
cttcagggatccattgaggccgtcaaacaagctcttcaggttcttccacaggataatgtc
actttgaagttcctactgcaagctactggtgatgtgagcgccagtgatgttgatcttgct
gtagcaagtaaagctattatttttggctttaatgttagaactccgggttctgtcaagagc
tatgcagacaataaaggtgttgaaatccgactatacaaagttatatatgatcttattgac
gatgtgcgaaaagcaatggagggtcttctggaatcagttgaggaacaagtgccaattggt
tcagcagaagtacgtgctgtgttcagcagtggtagtggtcgtgttgctggatgcatggtg
acagagggaaaagttgtggaagaatgtggtattcgtgtcactagaaaaggcaaagtagtt
catgttggtgtggtcgaatctttaagacgagtgaaggaagctgtgaaggaggttaatgcg
ggactggagtgtggtattggggttgaggatttcgatgactttgaggtgggtgatactctg
gaggctttcaactcagttcagaaaagacgaacactcgaggaggcctcagcatcaatggca
gcagcacttgaagaagtggggagaggcctgtaa
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