Solanum stenotomum: 125877826
Help
Entry
125877826 CDS
T08385
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 2 isoform X1
KO
K03255
protein TIF31
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sstn03012
]
125877826
Translation factors [BR:
sstn03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
125877826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_10
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_9
TPR_MalT
TPR_8
CLU
PAM2
Motif
Other DBs
NCBI-GeneID:
125877826
NCBI-ProteinID:
XP_049415052
LinkDB
All DBs
Position
9:53328781..53344461
Genome browser
AA seq
1859 aa
AA seq
DB search
MAPKTGKAKPHKAKGEKKKKEEKVLPNVIEISVETPNDSQVMLKGISTDKILDVRKLLAV
NVETCHVTNYSLSHEVRGTRLKDTVEIVSLKPCHLSLVEEDYTEEQSVAHIRRVLDIVAC
TTSFAGSSSSIKPTGRTGTESGSENALSEPKSGKPKPQEPKKAGAKPSKPDAVAAVCDGD
DVGDAAEKGDPAMMCPPPRLGQFYDFFSFAHLTPPIQYIRRSSRPFLEDKTEDDFFQIDV
RICSGKPTTIVASRTGFYPAGKRALSSHSLVGLLQQLSRVFDAAYKALMKGFTEHNKFGN
LPYGFRANTWVVPPFVADNPATFPPLPMEDENWGGNGGGQGGDGKHDHRPWAKEFAILAA
MPCKAAEERQIRDRKAFLLHSLFVDVSVLKAVASIKHLVDNSSSSTIPYEEKIGDLLISV
TKDMSDASKKLDNKNDGIQVLGMSPEDLAKRNLLKGITADESATVHDTSTLGVVVVRHCG
YTAIVKVAAEVNWGTNPIPQDIEIDDQAEGGANALNVNSLRMLLHKSSTPQPSSQVHKLQ
GTDVEDVLATKSLVRQVLSESMQKLQEEDSKQVKSIRWELGACWVQHLQNQASGKVESKK
TDEAKVEPAVKGLGKHGGLLKEIKKKSDDKSSKASSGNEASSGDANKKELEKLDEEMEIL
WKKVLPEAAYLRLKESETGLHLKSPDELISMAHKYYADTALPKLVADFGSLELSPVDGRT
LTDFMHTRGLQMCSLGRVVELADKLPHVQSLCIHEMVVRAYKHILQAVVAAVDNIANVAA
SIASCLNVLLGTPSAENGDSDDDLKWKWIETFLLKRFGWQWKDESREDLRKFAILRGLCH
KVGLELVPKDYDMDSPFPFKKSDIISMVPVYKHVACSSADGRTLLESSKTSLDKGKLEDA
VTFGTKALSKLVSVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLD
HPDTMKSYGDLAVFYYRLQHTELALKYVNRALYLLHLTCGPSHPNTAATYINVAMMEEGL
GNVHVALRYLHEALKCNQRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLQILQ
AKLGPDDLRTQNFLQDAAAWLEYFESKALEQQEAARNGTPKPDASISSKGHLSVSDLLDY
IAPDAEMKAREAQKKQARAKVKGKAGQNGGIATDEFEKDELLSPISPVVENSNDKENKSE
LDNKSELKIAEPTPKQSEHIFIEQTVLEKNDDVILEDTSEEGWQEALPKGRSTMGRKISS
SRRPNLAKLNTNFTNASHLPRARGKTTNFPSPRLTPNESAASSGLSPASKKFVKSASFSP
KLNSAASPSGGTERSSKPKSAPVTPAQAEQVVKTNSLVSSISVQAAGKLFSYKEVALAPP
GTIVKAVAEQLPKDSNSEQKKETVITDSTLPTTARTNDGEKAQKVGEEKQQDDFGEKTNQ
AVNDAQQSKEKAPVSAESSEGTKSDTSGEKDAVVTASTNSSVPGIQNNGSSSDSNATSKV
NMPESKAATDLVTEKDACLTNEGAAVKEKNDDEPGDLGSVTLPTGVDKDITSNASTMPTE
SDQQGDSETGKEATKKLSAAAPPFNPSPVPVFGTIPAPGFKEHGGILPPPVNIPPLLPLS
PVRRSPHQSATARVPYGPRLSGGYGRSGNRVPRNKPAFLNGEPNGDASHFAVPRIMNPHA
AEFVPGQPWVPNGFPVAPNGYMASSNGYPISPNSIPVSPDGSPASLNSTPVTEDGLSIYP
VEAGESPLAVTLEEAAENHDTAVADGTEVETSSSLVTDETESQQIMQDQEEDVEKLHDIP
KDDEKSQCENGEMSVDTPALSDEITASKETCSTVVLEEKGTKRWGDYSDGENEVVEVAS
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaaaacaggaaaagctaagccacacaaagcaaagggagagaagaagaaaaaa
gaagagaaagttctaccaaacgttatagagatatcggtggaaacacccaacgactcacaa
gtgatgcttaaggggatatcaacggacaagattttagatgtgagaaagctattagccgtc
aatgtggagacatgtcacgtgaccaattactccttgtcacatgaggtgagaggaacaagg
ctaaaagatacagtggaaattgtgtcgctgaaaccgtgccacctcagcttagtcgaagag
gattatacagaagaacaatcagtggcgcatattagaagagttctcgacatagttgcatgc
accacttctttcgccggttcatcttcttcaatcaaacccaccggtcgaaccggtactgaa
tccggttcagaaaatgcactctccgaaccaaaatcaggcaagcccaaacctcaggaaccg
aaaaaggccggcgctaaaccgtcgaagccagatgccgtcgccgccgtatgtgacggcgac
gatgtcggtgacgcggcggagaaaggtgaccccgcgatgatgtgtcctccgccgcgactg
ggacagttctatgactttttctcgtttgctcatctcactccgccgatccaatatatcagg
agatcaagtcgaccattcctcgaggataaaaccgaagatgattttttccaaatagatgtc
cgaatctgcagtggcaagccaacaacaattgttgcttctaggacaggtttctatcctgct
ggaaaacgtgctctttcgagtcactctttggttggattgttgcaacaattaagtcgagtt
tttgacgctgcatacaaggctctcatgaaaggattcactgagcataataagtttgggaat
cttccttatggttttcgagcaaacacatgggttgtccctccttttgttgctgacaatcca
gctacttttcctccacttcccatggaagatgagaattggggaggaaatggaggtggacag
ggaggagatggtaagcatgatcataggccgtgggcgaaggaatttgcgatcctggcagca
atgccttgtaaagcagctgaagaaaggcaaattagagataggaaagcgtttctactgcac
agtctatttgtcgatgtatcagttctcaaagcagttgcttccataaagcatctagtggac
aacagctctagttctacaattccatacgaggaaaaaattggcgatcttcttatcagtgtg
acaaaagacatgtcagatgcgagcaagaaattggacaacaaaaacgatggcattcaggtg
ctaggcatgtcgcctgaggatcttgcaaagagaaacttactaaaaggcataactgcagat
gagagtgcaactgttcatgatacttctaccttgggtgtagtggtggttagacactgtggc
tacacagctatcgtaaaagttgcagctgaggtgaactgggggacaaatcccattcctcag
gatattgaaatagatgaccaggcagagggaggtgcaaatgcattgaatgttaacagcttg
agaatgctattgcacaagtcatcaactcctcagccatctagccaagtacataaattacaa
ggtacagatgtcgaagacgttctagctactaagtctttagtaagacaagtgctcagcgaa
agcatgcagaagttacaggaagaagacagtaaacaagtgaaatctattagatgggagctg
ggtgcatgttgggtgcaacatttgcaaaatcaagcctccggaaaagttgagtctaagaaa
actgatgaagctaaagtagagccagcggttaagggtcttggaaagcatggtggtctgctg
aaggaaattaagaagaaatcagatgacaagagcagcaaagctagttcagggaacgaagct
tcttcaggtgacgctaacaagaaagagctagagaaactagacgaggaaatggaaattctt
tggaaaaaggtgctacctgaagcagcatatttgcgcctaaaggaatcagaaactggtctt
caccttaagtcacccgatgagttgatcagtatggcacataaatactacgctgatactgcc
cttccaaaactggttgctgattttgggtcactggagctttcacccgtcgatggaaggaca
ctgacagatttcatgcacaccaggggtttgcaaatgtgctccttggggcgtgtggtggaa
cttgcagacaaacttcctcacgtgcaatctctttgtattcacgagatggttgttcgagct
tacaaacacatactgcaggctgttgtggcagcagttgataatattgctaatgtggctgca
tcaatagcttcttgtttaaatgtattgcttgggactccgtctgcagaaaatggtgattca
gatgatgacttgaaatggaagtggatagaaacttttcttttgaagaggttcgggtggcag
tggaaggatgaaagtcgggaggatcttagaaaatttgccattcttcgaggtctttgtcat
aaggtaggacttgagcttgttcccaaagactatgatatggactctccatttcctttcaag
aagtcggatatcataagcatggtccccgtgtacaagcatgttgcatgctcatcagcggat
gggcgtacgctgctggaatcatccaaaacttctctggataaaggcaaactggaggatgct
gtaacttttggaactaaggcactctcaaaactcgtttctgtatgtggtccttaccatcga
atgacagcaggtgcatacagtctcttagctgtggtactctaccacactggagattttaat
caggcaactatttatcaacaaaaagctttggatattaatgaaagagagcttggacttgac
cacccagatacaatgaagagttatggagatttagcagttttctactaccgacttcaacac
acagagttggcattaaagtatgtcaatcgtgccctctatcttttgcatcttacttgtgga
ccttctcatccaaatactgctgcaacatatataaatgttgcaatgatggaggaaggtctc
ggaaatgtccacgttgcactcaggtaccttcacgaggctcttaagtgtaaccagagactt
cttggagctgaccatattcaaactgctgccagctatcatgctattgcaattgctctttct
ttaatggaagcatactccttgagtgttcaacatgagcaaactacacttcagatactgcaa
gctaaacttggacctgatgatttacgtactcagaattttctgcaggatgctgcggcatgg
cttgagtattttgaatctaaagcacttgagcagcaagaagctgcacgaaatggcaccccg
aagcctgatgcctctatctctagcaaaggccatctaagtgtctcggatttgttggattac
atagctccagatgctgagatgaaggctagagaagcgcaaaagaagcaagctcgtgcaaag
gttaaaggcaaagcagggcaaaatgggggaatagctaccgatgaatttgagaaggatgaa
cttctttctccaattagtcctgttgtggagaactccaatgataaagagaacaagtccgaa
ttagacaacaaatcagaattgaagattgcagaacccacacctaagcaatctgaacacatt
ttcatagaacagacagtactggagaaaaatgacgacgtgatactagaggatacctctgag
gaaggatggcaagaggctttacccaaaggtcgttcaacaatggggcgtaagatttctagt
tctaggagacctaaccttgcaaaacttaacaccaacttcacgaatgcttcccatttacca
agagctcgaggtaaaaccactaattttccatctccaagattaactccaaatgaatctgcg
gcgtcatctgggctatctcctgcttcaaagaagtttgtgaagagtgctagtttcagccct
aagttaaacagtgctgcttcaccatctggtggtactgagagatcttctaagcccaaatcg
gcaccagtcacccctgctcaagctgaacaagttgtcaaaactaattcacttgtcagctca
atcagtgttcaggcagctggaaaactgttttcttacaaagaagttgctttagctccacct
ggtaccattgtgaaagcagtggcagagcaattgccaaaggatagtaattcagaacaaaaa
aaggagactgtgataactgattcaactctaccgacaacagcgagaaccaatgatggagaa
aaggctcagaaagtcggtgaagagaagcaacaggatgattttggtgagaaaaccaatcaa
gcagtcaatgacgctcaacaaagtaaagagaaagcacctgtatcagctgaatcttctgag
gggacaaaatctgacacttctggggagaaggacgcagttgtcacagcttctacaaatagc
tccgttccgggtatccaaaataatggttcttccagtgattcaaatgcaacttccaaagtc
aatatgccggaaagcaaagctgctactgatttagtgacagagaaggatgcttgtcttaca
aatgaaggagctgcagtgaaagaaaagaatgacgatgaacctggtgatctaggaagtgtc
acattgccaactggagtagataaagatattaccagcaatgctagtaccatgcctactgaa
tcagaccagcaaggtgattctgagactggaaaagaagcaaccaagaaactttcggcagct
gcaccaccatttaatccatcacctgttccagtttttggcactatcccagcaccaggtttc
aaggagcatggaggaatattgccccctcctgtgaatatccctcctttgcttcctctgagt
cctgttcgtagatcaccacatcagtcagcaacagcacgagttccgtatggtccacgcttg
tcaggtggctatggtaggtctggaaatcgagttccacgaaacaagcctgcttttctcaat
ggtgaacctaatggggatgccagccatttcgctgttcctagaatcatgaacccacatgca
gctgagtttgtccctggccagccatgggttccaaatggctttcccgttgctccaaatggt
tacatggcttcatcaaatggatacccgatatcaccaaatagcataccagtatctccagat
ggttctccagcatccttgaacagtacaccagtgactgaagatggactttcaatatatcca
gttgaagcaggagagtcccctttagctgtaactctggaagaagctgctgaaaatcacgat
acagcggtggctgatgggactgaagtggaaacctccagtagtttggtaactgacgagaca
gaaagtcagcagatcatgcaggatcaggaagaagatgtggaaaaactacatgacattcct
aaagatgatgagaaatcacagtgtgaaaatggagaaatgtctgtagatacacctgcacta
tctgatgagattactgcttcaaaagaaacgtgtagtactgtcgttcttgaggagaaagga
accaagcgttggggagattatagtgatggtgaaaatgaggttgttgaggtagcaagttga
DBGET
integrated database retrieval system
