Solanum stenotomum: 125877853
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Entry
125877853 CDS
T08385
Name
(RefSeq) zinc finger protein NUTCRACKER
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sstn03000
]
125877853
Transcription factors [BR:
sstn03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
125877853
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_STOP2_C
zf-C2H2_jaz
zf-C2H2_6
zf-met
bZIP_C
Motif
Other DBs
NCBI-GeneID:
125877853
NCBI-ProteinID:
XP_049415087
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Position
9:complement(4917307..4919867)
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AA seq
499 aa
AA seq
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MTDEVISNGFTHDNSIEGSNPPPLKKKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICG
KGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKVCVHHHPSRALGDLTGIKKH
YCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRRDSFVTHRAFCDA
LAEETARVTAASNMYNPLAMENNINYHFIGAPLGPNMAQHFSSLFKPVSNNNENSDPLRR
DQLSLWNNIGVAQEQDQIGININNLREIHQISPLLHHTSPAPTTVYDANALLASRNSNAP
PVSYNNNNHINWDQFMGSKISPINNAEQLSNTSSANISVPSLFSAQQQIALSASTTNMSA
TALLQKAAQIGAITTTTTATDPSIFLGNFTMNNCNNNKNNDNSNKFCGFYVSTPTTNNSI
STSLGSDVDQSSSVNDFSATIHPIQMYPPSKRRHIHIEDSVKGVGGGAGSGAGEGGQTRD
FLGVGVQSICHPSSINGWI
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgaagtgatatcaaatggatttactcatgataactcaattgaaggatctaat
cctcctcctctcaagaaaaaaagaaatcttccaggaaatccagatcctgaagcagaagtg
attgccttgtcaccaaagacactgatggcaacaaatagatttttgtgtgaaatttgtggg
aaaggttttcaaagggatcaaaatctacaacttcatagaagaggacataatcttccatgg
aagttaaagcaaagaacttcaaaagaagtgagaaagagagtttacgtgtgcccggaaaag
gtgtgtgtgcatcatcatccttcaagagctttaggagatctaactgggatcaagaaacac
tattgtagaaaacatggagaaaagaagtggaaatgtgagaagtgttcaaagagatatgct
gtgcaatcagattggaaagctcactctaagacttgtggcactagggaatatagatgtgat
tgtggcactattttctcaaggagagatagctttgtgactcatagggcgttttgcgatgca
ttagctgaggagacggctagagttactgcagcatctaacatgtacaacccattggccatg
gaaaacaacatcaactaccatttcatcggcgcgccattagggccaaacatggcacaacat
ttctcttctctcttcaaaccagtttcaaacaacaatgagaactcggatccattgagaaga
gatcagctctcgctttggaataatataggcgtggctcaagagcaagaccaaataggtatc
aatatcaataatctccgcgaaatccatcagattagtccccttcttcatcacacttcacca
gcaccaacaacagtttatgatgcaaatgcccttcttgcatcacgtaattcaaatgctcca
ccagttagttataataataacaaccatatcaactgggatcagttcatggggagcaaaatc
tctccaattaacaatgctgaacaattatcaaacacctcatctgcaaacattagcgttccg
tcattattcagtgctcaacaacaaattgcactttctgcctctactacaaatatgtctgca
acagctttactccaaaaagcagctcagatcggagcaataacaacaacaacaactgcaacc
gatccatcgatattcctcggaaatttcaccatgaataattgcaacaacaacaagaacaat
gacaatagcaacaagttttgtggattttatgttagtactcctactacgaataactcaatc
agtactagtctcggaagtgacgtagatcagagttcatcagtaaatgatttctccgctact
attcacccgatacagatgtatcccccttcaaaacgccgtcacattcacattgaagatagt
gtaaaaggagtcggaggcggagcaggatcaggagcaggagaaggaggacaaactagggat
tttttgggagttggagtacaatcaatttgtcacccttcatcaatcaatggatggatatga
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