Solanum stenotomum: 125877956
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Entry
125877956 CDS
T08385
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00040
Pentose and glucuronate interconversions
sstn01100
Metabolic pathways
Module
sstn_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125877956
Enzymes [BR:
sstn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
125877956
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
125877956
NCBI-ProteinID:
XP_049415205
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Position
9:complement(11849813..11852846)
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AA seq
402 aa
AA seq
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MELNIKTLFVFTLMLFLARLGAAQAPAGQSGVFDVTKFGATPNGDISKAILDAFKEACAS
TSASTIIVPKGTFQMKQVKLEGPCKAPLEFQLQGTLQASPDPKILPEGEWFTVNYLNQFT
LSGTGIFDGQGKAAWAQNDCAKTKCAHLPYNLSFNFLNSSTIQDITSKDSKNFHMNVNGC
NNLTFNRITITAPKESINTDGIHVARSKNVNITDSVIGTGDDCISVGDELEQLHITKVTC
GPGHGISVGSLGKTPGEKPVVGVYVKNCTFINTDNGVRVKTWPASHQGVVTELHYEDIIV
QNVSNPIVIDQVYCPYNQCNKDLPSLVKISKVSIKNVKGTSRTQDAVLLLCSKGVPCEGV
EVGDIDITYNGKEGPAKTSCENVKPTFVGKQNPPVCAGAQTA
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaatatcaagacattatttgtatttacattaatgttatttttagcacgactt
ggagcggctcaggcaccagcaggtcagtcaggagtgtttgatgttaccaaatttggcgca
acacctaatggagatattagtaaggcaatattggatgcatttaaagaggcatgtgcatca
acaagtgcaagtacaataatagtcccaaaaggtacattccaaatgaaacaagtaaaatta
gaaggtccatgcaaggcacctcttgagtttcaattacaaggcactttacaagcttctcca
gatcctaaaatactccctgaaggtgaatggtttactgttaattatcttaatcaattcaca
ttatctggtactggtatttttgatggacaaggtaaagctgcatgggctcaaaatgattgt
gccaaaaccaagtgtgcacatcttccctataatttgagcttcaacttccttaacagttca
acaatccaagacataacttcaaaagacagcaaaaatttccatatgaatgttaacggttgc
aacaacttgacatttaaccgaattactattacagctccaaaggaaagcatcaacactgat
ggtattcacgttgctcgatcgaaaaacgtgaacataacagatagtgtaattggaacagga
gatgattgtatctctgttggtgatgaattggaacaacttcatattactaaagttacttgt
ggacctggacatggtattagtgttggaagtcttggaaagactcctggtgaaaaacctgta
gtgggagtttatgtcaaaaattgcacatttattaatactgataatggtgttagggtcaag
acatggccagcttcacatcaaggtgttgttactgagttgcattatgaagatattattgtg
caaaatgttagcaaccctattgttattgatcaagtttattgcccatacaatcaatgcaac
aaagatttgccatcactagtgaagataagcaaagtgagcataaaaaatgtaaagggtaca
tcaagaacacaagatgcagtactactattatgtagtaaaggagtaccatgtgaaggagtg
gaagttggagatatagacattacctataatggaaaggaaggaccagcaaagactagttgt
gagaatgtcaagcctacttttgtaggaaagcagaatccacctgtctgtgctggagctcag
actgcttga
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