Solanum stenotomum: 125877970
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Entry
125877970 CDS
T08385
Name
(RefSeq) ATP-dependent DNA helicase PIF1-like
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sstn03032
]
125877970
03029 Mitochondrial biogenesis [BR:
sstn03029
]
125877970
Enzymes [BR:
sstn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
125877970
DNA replication proteins [BR:
sstn03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
125877970
Mitochondrial biogenesis [BR:
sstn03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
125877970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
Pif1_2B_dom
AAA_22
DEAD
SLFN-g3_helicase
PhoH
ResIII
AAA_16
ATPase_2
AAA_11
nSTAND3
NACHT
UvrD-helicase
Herpes_Helicase
NPHP3_N
TsaE
AAA_5
ATPase
ABC_tran
AAA_7
AAA_14
NB-ARC
Bac_DnaA
NTPase_1
TrwB_AAD_bind
Sigma54_activat
Viral_helicase1
T2SSE
cobW
Mg_chelatase
RNA_helicase
ATP-synt_ab
AAA_24
DUF815
ORC-CDC6-like
Helicase_RecD
HerA_C
Motif
Other DBs
NCBI-GeneID:
125877970
NCBI-ProteinID:
XP_049415219
LinkDB
All DBs
Position
9:2831966..2834766
Genome browser
AA seq
503 aa
AA seq
DB search
MKLSLLYTAKTAYRFLSSKATWGCQVSAKSKVKSCRSELISTKKPKVKLTEQQNQILEAI
SNGNSVFITGSAGTGKTYLLQHIITKLRKIHGKSRVFVTASTGVAACSLNGQTLNSFAGI
GLGDASSVDLLSRVSLDKRAYRRWNKVRALVIDEISMVSGEVLDNLEFIARSIRSEELGC
EEKIWGGIQLVVSGDFFQLPPVINKKGQQKEFAFEADCWNASFDEQIELKTIFRQSDAQL
IKLLQGIRKGKYDSEDLKLLDQCCSKVEPDSSAVQLYPRIEDVSRVNAERLDCLDEVLFH
YQALDSGKDPWKKQLKNGIAPELLKLCVGSRVLLTKNIDVVSGLVNGATGTILDFAVVQD
THKLYDREISDICGNGNLLPVVRFDSGQELMIGVERWYVMEGDEAVAMRKQIPLILAWAL
SIHKCQGMTLNNLHTDLYRVFGFGMVYVALSRVKSLDGLNLVNFNPSKIKANPKVLQFYE
RLSAEKDEQKGDSVTDDIKFGSL
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtcattgttgtacacagctaaaacagcctataggttcttgagctccaaagct
acatgggggtgtcaagttagtgcaaagagtaaggtaaaaagttgtagaagtgaactcata
agtactaaaaagcctaaagtgaagttaactgagcagcaaaatcaaatcttggaagcaatt
tcaaatgggaattctgttttcattactgggtcagcagggactggaaaaacctatttactt
cagcatatcatcactaaacttaggaagattcatgggaaatctcgggtttttgttacagct
tcaactggggttgctgcttgttccctcaatgggcaaacccttaattcttttgctggaatt
ggacttggtgatgctagttctgtggatttgctatctagggtttcgttggataagagagcg
tatcgaagatggaataaagttagggctttggttatcgatgagattagtatggttagtggt
gaggttttagacaatcttgagttcattgcaaggagcattagaagtgaagaacttggctgt
gaggagaagatttggggtgggatacaattagttgtgagtggagatttttttcaacttcca
ccagttattaataagaagggacaacagaaggaatttgcttttgaagctgattgttggaat
gctagttttgacgaacaaatagaacttaaaactatctttaggcagtcagatgcacagctt
ataaaactgctgcaggggattaggaaagggaagtatgattccgaggatttgaagttattg
gatcaatgttgctcaaaggtggagccagattcttcagctgttcagctctacccacggatt
gaggatgtgagtagagtgaacgctgaacgactagactgtttagatgaggtactgtttcat
tatcaagctcttgatagtggtaaagatccttggaagaagcagcttaagaatggaattgca
cctgagctgctcaaattgtgtgtgggatctcgggttctcttgacgaagaacattgatgtt
gttagtggacttgtgaatggtgctactggtacaatcttagattttgctgttgttcaagat
actcataaattatatgaccgtgagatttctgatatttgcggaaatggtaacctgctacct
gttgttagatttgattctggccaagaactgatgattggtgtagaaagatggtatgtaatg
gagggagatgaagctgttgcaatgcgaaagcaaattccactcatattggcttgggctcta
agcattcacaagtgtcaagggatgactttgaacaacctccatacagacctctaccgtgtt
tttggctttgggatggtatatgttgctctttcgcgtgttaaaagcttggatggccttaat
ctagtcaatttcaatccgtcaaagatcaaggcaaaccccaaggttttgcagttctatgaa
agattgtctgctgagaaagatgaacaaaagggagacagtgtaactgatgatatcaaattt
ggaagtctctga
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