Solanum stenotomum: 125878007
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Entry
125878007 CDS
T08385
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase FLY2-like isoform X1
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125878007
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125878007
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125878007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-RING_5
zf-C3HC4_3
zf-C3HC4
PHD_NSD
zf-ANAPC11
DUF2921
zf-RING_16
zf_RING_Vps8
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
125878007
NCBI-ProteinID:
XP_049415261
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All DBs
Position
9:complement(5243190..5254811)
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AA seq
565 aa
AA seq
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MGVAKNLIFLRKNSGVWLRILFYLWFFFGGFCQVKGLRPLREKYRSWGDEQWLSARKDEN
EFGPFSAWNITGTFRGSWRFLDSKNSSSLFPDFKKSNGNYVLELISTPTKITGVHYVQGV
IIFHDIFDNERGGAQIRVEGVYVWPFRQLWMVAHSSKEGDFGQEDDYLLSNPYHLLGTFS
SQVFQESPRDKIWKRKHSPIYEMEKHCNVEIAAQISRVSSSTNDGDQDHYHLEGLMESPS
VDDDGDCFSPMLLNATSINIEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAK
VSILMIGQQGIIDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKAN
RPMTSGEGWQAMRRELSVLYSRFYGILLGGILIMYEFHRFLGPLLFLLHSFWIPQIVTNV
IRDTRKPLHPHYILGMTVTRLAIPLYVFGCPHNFMRIEPDKSWCICVGIFMAVQALVLLL
QHYLGSRWFIPRQILPEKYSYYRRFDQKGNHATDCVICMTAIDLTQRSNNCMVTPCDHFF
HSGCLQRWMDIKMECPTCRRPLPPA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtggctaaaaatttgatctttttaagaaagaattctggggtttggcttagaatt
ctgttttatttatggtttttctttggagggttttgccaagtaaagggactcagacctctt
agagaaaagtatcgttcgtggggcgatgagcagtggctttctgcaaggaaggatgagaat
gaatttgggccattttctgcttggaatataacaggaaccttcagagggtcttggaggttc
ctagattcaaagaatagctcttccctttttcctgatttcaagaaatccaatggaaactat
gtcctggaattgattagtactcctacaaaaataactggtgtacactatgttcagggagta
ataattttccatgatatttttgacaatgaacgtgggggtgctcaaatcagagtagaaggt
gtatatgtatggccattcagacaactttggatggtagctcacagcagcaaagagggtgac
tttggccaggaagatgattatctgttatcaaatccttatcatttgcttggaactttctca
tctcaggtcttccaagagtcgccacgagataagatttggaaacggaaacactcgcctatt
tatgagatggagaaacattgtaatgttgaaattgcagcacaaatttctcgagtgtcatct
tccactaatgatggagatcaagatcattatcatctagaaggattgatggagagcccttca
gtggatgatgatggagactgtttctcccccatgctattgaatgccacttctatcaatata
gaggtttactacaacaaagcagttaactacacgttgatggtcacttttgtttcttttctt
caagtgctccttctcattcggcaaatggaacatagcaatacccaatcaggagctgccaaa
gtttcaattttgatgatcgggcaacagggaataattgatgcttatctttgtcttctacat
ctgactgcaggcatacttgttgaatcgctgttcaatgcttttgcaaccgctgcatttttc
aagtttgttgtcttctcaatatttgagatgagatatcttctcgctatatggaaggcaaat
agacctatgactagtggagagggctggcaagcaatgagacgtgaactgtcagttctgtac
agccgcttctatgggatccttttaggtggaattttaatcatgtatgaattccataggttt
ctggggccactccttttccttttacactctttttggatacctcaaattgtaactaacgtt
attcgtgacacgagaaaaccgttgcatcctcattacattttgggaatgactgttactcgg
ctagcaattccactatatgtctttggttgtcctcacaattttatgcgcatagagcccgac
aaaagttggtgcatctgtgtgggaattttcatggcagtgcaggcattagttcttcttttg
cagcactatcttggatctcggtggttcattccacgacagattttacctgaaaaatatagt
tattacagaagatttgaccaaaaaggaaatcatgctactgactgtgtcatttgcatgact
gctattgatctcactcaacgttcaaataattgcatggtgacgccctgtgatcatttcttt
cattcgggttgtttgcaaagatggatggacataaagatggagtgcccaacatgccgacgt
cctcttcctccagcctga
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