Solanum stenotomum: 125878224
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Entry
125878224 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125878224 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125878224
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
125878224
SSDB
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GFIT
Other DBs
NCBI-GeneID:
125878224
NCBI-ProteinID:
XP_049415383
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Position
10:56793905..56802181
Genome browser
AA seq
1396 aa
AA seq
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MPRSSKHKSHKQSKHSPKEGRDYSYSDSDEEMKTKEKEKEKERSSKEDSLARVSKDSIHS
GSGEKRKHSSQSKEGKDSKDLSGYGNGDASEEYVSSKRRKEKVEAGSGGADRWNGAADSA
LKGESLKIDADKGSKGKETKSSSDSKSKSSKKEGNVASLVEKEESKSGRVESKRKSEKDS
GRKEGKDSKEVKEKERGSDREKKGHESKRDDVDNVKKQGSQSGDASEEKQNKKGRETAEW
TIQNEVPNIDLDKDAEKRARKRREIPGDRDKYDDDINESDDRRLSSRSERTKGEKQRHEK
HKEYKEDVDKDDKHKDGRYREDVDKDRKRRDDKYREDSDRDNRRRDDKYLEDVDRDSRRR
DDKYRDDGDRDNRRKDGRYREDGERDSRRRDDKYREDGDNDNRHGDGKYREYGEKDGHHD
EDRYHEEGERDDRQSDIKYREDSERDKRRKDEKHRDDFERHGRCKDGSEADESDKKRRLN
DAKYGDERAPRDHSGDRSDAKRSRDEGHSSDLHLRKSGMHEGNPGYDRARYKDEPGRRRV
LDKEDLGDIRSRSSKDQRSEAEKRSISSARVESVTDRGRSTSRNADAEVTPQKSRWKTSP
SAGPHTTRDNYRLSKQEDSKYPYEERIRHGGTSRDYGGSGASIERISSSRSTEKMIQKED
IFLGDYSAERRLKSDVRSSPMQLVDRSPTSASNERRHLNRSEVRRSLDVEDSTQRSGGGS
REFKEGRGNRDFAGDAFAGDELSQMDGDNASDSSPFIRGSHFSGSSKSALPPPPPFRSGV
DSPSMFGSLDDDSRGKSTNRHRRISDPTIGRMQGNAWKGVPNWQSPLANGFMPFQHGPPP
VGFHPAMQQFPGPPMFGVRPSMELSHPGVPYHMPDADRFSGHGRPMGWRTPLDDSCGPPL
HGWDANNFGEEAHLYGRPDWDQNRTLSNNSRSWETIGDVWKGPIRGTSVELPSGSQKEVC
SIQGPDNSFAAQLAQQALGEQKKTDQDTESNDISFQSSSVPGRSTLEDLKINHEELPIDV
ESSGKEEASLSNVYLKKLDISADLTEPELFDQCTSLMDVEQILTSDNSKILFLEVKRGAV
ESNVTLPSKFSSVPLIATVADSVFQKAISLYKKRREEIEFTNGGHFTFSGQLGVSYPAPK
LENSSSVYGKLECSGLADDGLVEEGDEGTDLPVSSLSSEEVVLSQTALQELCEPMGLNPG
EKSNLHTSIDVPAEKSDHPTSIDGGAVLTKKSDLPTSIDEGAVPTEKSDLPTSMDEGAIL
TEKSDFPTSMDEGGVPTEKSDLPTSMNEGAVPTEKSDLPTSMDEGADTVVDVAQESKFAE
NSLSVEEVGQTDALAPLVCKDLMGADDNVKEEKFVDAKCGTLPHTDVSTEVFEAAMPESI
ESVNLSRIQHSPESTH
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggagttcaaagcataaatcgcataagcagagtaagcatagtccgaaggagggt
agggattattcgtactcggattcggatgaggaaatgaaaaccaaggagaaagagaaggag
aaagagaggagtagtaaggaggatagtctggctagggtttctaaggattcaatccattca
ggttctggtgagaagagaaaacattcttcccaatctaaggaaggtaaggatagtaaagat
ctaagtgggtatggaaatggtgatgcttcagaggagtatgtttcttctaagcgtcggaaa
gagaaggtagaggcgggtagtggtggtgctgatagatggaatggtgctgctgatagtgca
ttgaagggagaaagtttgaaaattgatgcagataagggttctaaggggaaggaaacaaag
agctcaagtgattccaaaagtaaaagcagtaagaaagaaggtaatgttgcctcattggtg
gaaaaagaagagagtaagagtggaagagtggagtcaaagaggaaatctgagaaggattct
ggtcgaaaagaaggcaaggattccaaggaggtgaaggaaaaggagagagggtcagacagg
gaaaagaagggtcatgagagtaagcgcgatgatgttgacaatgtgaagaaacaagggtct
caatctggtgatgctagtgaagaaaagcagaacaaaaaaggtagagaaactgctgagtgg
actatccaaaatgaggtaccaaatattgacttggacaaagatgctgagaaaagggcacgg
aagagaagagaaatccctggtgatcgggataaatatgatgatgacataaatgagagcgat
gacagacggttatcttcgaggtctgaacgtactaaaggtgaaaaacagcgacatgagaaa
cataaagagtacaaggaagatgtcgataaagatgataagcacaaggatggtaggtatcgt
gaggatgttgataaggacagaaaacggcgtgatgataaatatcgagaagatagtgataga
gataatagacgtagagatgacaagtacctggaagatgttgacagagatagcagacgccgg
gatgacaaatatcgtgatgatggtgacagggataataggcgcaaggatggtagatatcga
gaagatggtgaaagagatagtcgtcgtagggatgacaaatatcgtgaagatggtgacaat
gataacaggcatggggatggtaagtatcgagagtatggggagaaagatggccatcatgat
gaagatagatatcatgaagagggtgaaagagatgataggcagagcgacatcaagtataga
gaagacagtgaaagagataaaaggcgcaaggatgagaagcaccgggacgattttgaaaga
catggcagatgcaaggatggtagtgaagcagatgaaagtgataaaaagaggagactcaat
gatgccaagtatggggatgaacgtgctccgagagaccattcaggtgaccggtctgatgcg
aagcgttctagggatgagggtcattcttctgatttgcatttgaggaagtcaggtatgcat
gaaggtaaccctggttatgatcgtgcaaggtataaagatgagccaggaagaaggagagtg
cttgataaagaggaccttggagatattagatctcggagcagtaaagatcagcgatctgaa
gcagagaagagatccataagcagtgctagagtagagtctgtcactgatcgtggaaggtct
acctcgaggaatgctgatgcagaagttactccacaaaaaagcaggtggaagacttcgcct
agtgctggacctcatactacaagagataattacaggctgtcaaaacaagaagactccaag
tatccttatgaagaaaggattcgacatggtggaacatctcgagattatggtggttctggt
gcatcaattgagagaatttcttcatcccgttcaacagagaaaatgattcagaaggaggac
atctttcttggagattactcagctgaacgacggcttaaatcagatgttcgcagttctccc
atgcagttggtggatagatctcctacttcagcgagcaatgagcgaagacacttgaataga
tccgaggttcgccggagtcttgatgttgaggattcaacacagagaagtggtggtggttcc
agggaatttaaggaaggcagaggaaatcgtgactttgctggtgatgcatttgcaggtgat
gaactatctcaaatggatggagataatgcctctgattcttctccttttatcagagggagt
cacttttcaggcagttcaaagtctgctttacctccccctcctccatttaggtctggggtt
gacagcccatcaatgtttggctctttggacgacgacagtagagggaagtcaaccaaccgt
cacagaagaattagtgatcctactataggaagaatgcaaggaaatgcttggaagggggtt
ccaaattggcagtcacctctggcaaatggtttcatgcctttccagcatggtccacctcct
gttggttttcatcccgcaatgcagcagtttcccggaccaccaatgttcggtgttaggcct
tcaatggaattgagtcaccctggggttccttaccatatgccagatgcagaccgcttttct
ggccatgggcgcccaatgggttggcgaactccactagatgattcatgcggtcccccattg
catgggtgggatgctaacaattttggtgaagaagctcacctttatggaaggccagactgg
gaccagaataggactttgtccaacaatagtcggagttgggagacaattggtgatgtatgg
aaagggccaataaggggcaccagtgtggagctgccatctggttcacagaaggaggtctgt
tcaattcagggcccagataattcttttgctgctcagttggctcagcaagctctgggtgag
caaaagaagacagatcaagatactgaaagcaatgatatcagttttcagtccagcagtgtt
cctggaaggagcactctagaagatttgaaaattaatcatgaagagctaccaattgatgtt
gagtcatcagggaaagaagaagctagtcttagcaatgtttacctcaaaaagcttgatatc
tcggcagatctgacagagcccgagttgtttgatcaatgtactagtttaatggatgttgag
cagatcttgacatctgataactcaaagatcttgttcttggaggtaaagcggggtgctgta
gaatctaatgtaacgctgcccagcaaattttcaagtgttccactcattgctactgtggct
gattctgtttttcagaaagccatttccctttacaagaagaggagggaggaaattgaattc
acaaatggtggacattttactttttctggtcagctaggtgtgtcctatcctgcacctaaa
ttagagaattcaagttcagtatatggtaaacttgaatgctccggtctggcggatgatggg
ctagtagaagagggtgatgaggggactgatctccctgttagttctctcagttctgaggag
gttgtactttcacaaaccgcacttcaggagctgtgtgagccaatgggtttgaacccaggc
gagaaatcaaatctccatacttccatagatgtcccagccgagaaatcagatcaccctact
tccatagatggaggagctgtcctgaccaagaaatcagatctccctacttccatagatgaa
ggagctgtcccgaccgagaaatcagatctccctactagcatggatgaaggagctattctg
actgagaaatcagatttccctactagcatggatgaaggaggtgtcccaaccgagaaatca
gatctccctactagcatgaatgaaggagctgttccgaccgagaaatcagatctccctact
agcatggatgaaggagctgatacagttgtggatgtggctcaggaaagtaaatttgcagaa
aactcgttgtctgtggaagaggtgggccaaactgatgcccttgctcctcttgtgtgtaaa
gatttgatgggggctgatgataacgtcaaagaagagaagtttgttgatgctaaatgtggt
actcttccacacactgatgtgtctactgaggtatttgaggcagcgatgccagagtcaatt
gagtcagtaaatttaagtcggatacagcattctcctgaaagtacacattga
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