Solanum stenotomum: 125878266
Help
Entry
125878266 CDS
T08385
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125878266
Membrane trafficking [BR:
sstn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
125878266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
FimL_2nd
Motif
Other DBs
NCBI-GeneID:
125878266
NCBI-ProteinID:
XP_049415429
LinkDB
All DBs
Position
10:4789675..4798349
Genome browser
AA seq
1458 aa
AA seq
DB search
MASNPPFLVEDQTDEDFFDKLVNDDDDDVGFKVTTSSTGLGAGASSVYVDGNETDEVKAF
ADLSISDDVDSGVETGKKEGEKVDKSDDSNAKPGLVVEGNGEKSSGSLVSLTSVGSDGLL
DESSNGNLETEVTDGKTENHASGSSNSGVKEVGWSAFHADPVTNDASGFGSYMDFFSELG
DKNGDATGNVGENVNKGSTVSPAEQVHDKKKVHETAYLENTISLTQGQDSYAHDATTEQV
ADGQDLNSSQYWENLYPGWKYDASTGQWYQVDNYESGANVQGSTDSSLVSDGTSEVLYQQ
KTAQAVSGNVAESGTTESVTNWNQGSQVNGSTENVTNWNQASDNTSAVTDWNQVSLASDA
GGVTADWNQASQLNNGYPSHMVFDPQYPGWYYDTVALEWRSLESYTPSAQSTVQGESQLD
QNGLASVQTFSYNNDQRNYGAYGHNDNSRFQGFSSSGGDYNWSGTLGNYNQHSSNMSQNE
NAAKSNHMSEYSGNQQLENHYNQDFSATSHFNRQISNHYEGTVPYNAKAIQNQNDQRFLP
GGGFSHQFSQPTLQHHEQKHASNDYYGTQTTANYSQQAFQSSQQFGHAPTAGRSSAGRPP
HALVTFGFGGKLIVMKDYSSSGNSSFGSQNPVGGSISLLNLMDVVSERVDSSSLAIGACD
YTRALCQQSFLGPLVGGSPSIKELNKWIDERISNSESPDMDYRKGEVLRLLLSLLKIACQ
YYGKLRSPFGTEAVLKESDVPETVVAKLFASVKRNGMQLNQYGTVAQCLQQLPSEGQMRT
TASEVQSLLVSGRKKEALQCAQEGQLWGPALVLAAQLGDQFYVETVKQMALQQLVAGSPL
RTLCLLIAGQPADVFSVESTSQSGMPVVNAVQQPAQFGANIMLDDWEENLAVITANRTKD
DELVLIHLGDCLWKERSDIVAAHICYLVAEANFEQYSDTARLCLVGADHLKFPRTYASPD
AIQRTEIYEYSKVLGNSQFILPPFQPYKLVYAHMLAEIGKISDALKYCQALSKSLKTGRT
PETETLRQLVSSLEERIKTHQQGGFSTNLAPAKLVGKLLNLFDTTAHRVVGGLPPPMPTN
GSSQGNGPRVSSSQSTMAMSSLIPSSSVEPISEWAADSGRMTMHNRSVSEPDIGRTPRQV
DSSKEASSSNTGSNASGAGGTSRFRRFSFGSQLLQKTVGLVLKPRQGRQAKLGDSNKFYY
DENLKRWVEEGAALPAAEPPLAPPPTAAAFQNGAPDYNVKSVLKSESSICNNGFPEMKSP
TSADNGAGIPPLPPTSNQFSARDRMGVRSRYVDTFNKGGGNPTNLFQSPSVPSIKPATAG
NAKFFVPAPMSPVEETGNSTSNEQETSSNSESDSFSAVNGSIHYPAPTSSAAPMQRFASM
DNLSNKGAVASSLSANSRRTASWSGSFPDAFSPNRSEIKPPGSRLSMPPSSFMPSDVNSM
HSSANGGSFSDDLHEVDL
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaatcctccatttctagtggaggatcagacggatgaggatttttttgataaa
ttggttaatgatgatgatgatgatgttggttttaaggtaactacatcgtcaacgggtttg
ggtgcgggtgcaagctcggtgtatgttgatggaaatgaaactgatgaggttaaagccttt
gctgatctcagtataagtgatgatgtcgatagtggagttgaaactgggaagaaggaaggg
gagaaagtagataaaagtgatgatagcaatgctaaaccgggtttggtagttgaggggaat
ggagagaagagtagtggttctttagtgtcattgacttctgtggggtcagatggtttactt
gatgagtccagcaatggtaatttggagactgaggtaactgatggtaagacagagaatcac
gccagtggatcgagcaattcgggtgtgaaggaagttggatggagtgctttccatgctgat
ccagttacaaatgatgcttctgggttcggatcctacatggactttttcagtgaattgggc
gataaaaacggtgatgcaacgggaaatgttggtgagaatgtgaataaagggtcaactgtt
tcgccagcggaacaggttcatgacaaaaaaaaagttcatgaaacagcgtatttggagaat
actatttcgttaacacagggtcaagatagttacgcccatgatgctaccacagaacaagtt
gcagatggacaggatctaaatagtagtcagtattgggaaaatctttatccaggatggaag
tatgacgcaagtactgggcagtggtatcaggttgataattatgaatcaggagctaatgta
caagggagtactgattctagtttggtttctgatggaacatcagaggtcttgtaccaacag
aaaactgctcaggctgtttctggtaatgtggctgagagtggtacaactgagagtgtcact
aattggaatcagggttcgcaggtaaacggttctactgagaatgtgacaaactggaaccag
gctagtgacaatacgagcgctgtgactgactggaatcaggtgtcactggctagtgatgca
ggtggtgtcacggctgactggaatcaagcctcacaacttaacaatgggtatccgtcacat
atggtttttgatcctcagtaccctggttggtattatgatacagttgcacttgaatggcgc
tctttggagagctacacaccgtctgctcaatcaactgttcaaggtgagagccagctggat
cagaatggtttggcttcagtgcagactttctcttacaataatgatcaaaggaattacggt
gcatacgggcacaatgacaatagtagattccaagggtttagcagcagcggaggagattac
aactggtctggcactttaggtaattacaatcagcatagctcaaatatgtcacaaaatgaa
aatgctgcaaagagtaaccatatgtcagaatatagtgggaaccagcaattagagaaccac
tacaaccaagatttttcggcaaccagtcattttaataggcaaatatctaatcattatgag
ggaacagttccatacaatgcaaaagcaattcaaaatcaaaatgaccaacgatttctccct
ggtgggggtttcagtcatcaatttagtcagccaacactccagcatcatgagcagaagcat
gcctcaaatgattattatgggactcaaactacagccaattattcccagcaagcatttcag
agcagccagcagtttggtcatgctcccactgcaggaagatcatctgctggccgtccacca
catgctttggttacttttggttttggtggaaaactgattgtgatgaaagattatagttct
tctggaaactcatcctttggaagtcagaatcctgtaggaggttcaatatctttgctcaat
ttgatggatgttgtctctgagagagttgacagttcaagtcttgcgataggggcatgtgac
tatacccgagctctgtgccaacaatcattccttggcccactagttggtggaagtcccagt
atcaaggagttgaataaatggattgatgagaggatttcaaactctgaatctcctgacatg
gattacaggaaaggcgaagttttgaggttgcttctgtcattgctaaaaatagcatgtcag
tattatgggaaacttcgttctccttttggtactgaggctgtgttgaaggaaagtgatgtt
ccagaaacagtggtagccaaattgtttgcttctgtgaagcggaacgggatgcaactcaat
caatatggcactgttgcccagtgcttgcagcaattgccctctgaaggacagatgcggact
acggcttctgaggttcaaagtcttctagtatctggaagaaagaaagaagcattacaatgt
gcacaagaggggcagttgtggggaccagctcttgttctcgctgcacaacttggtgatcag
ttctatgtagaaacggtgaagcaaatggcacttcaacagttagtagctgggtcacctttg
cggacactgtgcctactaattgcaggtcaaccagctgatgtcttttctgtagaatctaca
tctcaaagtggcatgcctgttgtaaatgcggttcaacagcctgcacagtttggtgctaat
atcatgctggatgactgggaagagaatttggctgttattaccgcaaacagaacgaaggat
gacgaactggtgcttattcatcttggcgattgtttgtggaaagagaggagtgatattgtt
gctgcacacatttgctatctggtggccgaagcaaactttgagcaatattcagatacggca
agattgtgtcttgtgggtgcagatcacttgaaattcccccgaacttatgctagtccagac
gctattcagaggactgagatttatgaatactcaaaggtgctggggaattctcaatttatt
ctccctccttttcaaccatataaacttgtatatgcacacatgctagctgaaattgggaag
atatcagacgcattaaagtactgtcaagcattgtcgaaatcacttaaaactggccgaacc
cctgagactgaaacactgagacagttggtgtcgtctcttgaggaaaggattaaaactcac
caacagggagggttctccacaaatttggctcctgcaaaattggttggtaaattgctgaac
ctttttgataccacggctcatcgtgttgttgggggcttaccaccaccgatgccaacaaat
ggcagttcccaagggaatgggcctagagtctcaagtagtcaatcaaccatggcaatgtca
tcactgatcccctcatcgtctgtggagccaataagtgaatgggcagctgatagcggtaga
atgacaatgcacaatagaagtgtttcagagcctgacattggaagaactccaagacaggtt
gactcatcaaaggaagcaagctcaagtaacacaggaagcaacgcatcaggagctggaggg
acatcacggtttcgtcgctttagctttggctcccagcttctccaaaaaactgttggatta
gtcctcaaaccccgtcaaggccgtcaggcaaaattgggtgattcgaataaattttattat
gatgaaaatcttaaaagatgggtagaggaaggagcagcacttcctgctgcggaaccaccc
cttgcacccccaccaaccgctgctgctttccagaatggagcaccagattataatgtgaag
agtgtattaaaaagtgaaagttctatatgcaacaatgggtttccggaaatgaagagtcca
acttctgctgataatggtgcgggaatcccaccacttccgcctacctccaaccaattctca
gctcgtgatcgtatgggtgtccggtcaaggtacgttgacacgttcaacaaaggtggtggt
aacccaacaaatctattccagtcgccttctgttccttccataaagcctgctactgctggc
aatgccaagttttttgttcccgccccgatgtcccctgttgaagagacggggaacagtact
tccaatgagcaagaaacttcaagtaatagtgagagtgattcattttctgctgttaatgga
tcgattcattaccctgcaccaacatcaagcgctgcgcctatgcaaagatttgcaagtatg
gacaacctctccaataaaggagcagttgctagctctctatcagccaactctcggcgaact
gcatcatggagtggcagctttcctgatgctttttccccaaatagatctgaaataaaacca
ccgggctctagattgagtatgcctccgtcttcattcatgcctagtgatgttaattcaatg
cattcctcagcgaatggtggcagtttcagtgatgaccttcatgaagtagacctgtga
DBGET
integrated database retrieval system
