Solanum stenotomum: 125878378
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Entry
125878378 CDS
T08385
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 20-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sstn01002
]
125878378
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125878378
Enzymes [BR:
sstn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125878378
Peptidases and inhibitors [BR:
sstn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125878378
Ubiquitin system [BR:
sstn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125878378
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
125878378
NCBI-ProteinID:
XP_049415580
LinkDB
All DBs
Position
10:complement(50519467..50523976)
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AA seq
712 aa
AA seq
DB search
METLCSKTLETGSNPVDFVSSDETLDRSSPISADRNLPNTENSAGLNESEELCMEEEELD
ASPVRTYSAPVYCSRWGQPWGKITDYKPLDSQPTDAEPEDEPSPFDWTDGSSENKVETEK
LATVESQWNSYRDEEAKFMQGAGLANLGNTCFLNAVLQSFMHTVPLIQGLQSIDHATPCT
SYLKGFCVICALRKLIDASLFSEAGVVSPWKFVNNLNYFSSTFHRFQQEDAHEFLQCFLD
KLERCCDESRPKDCQTLETDNIVKQAFGGRLVSKLRCCNCGHCSDTYETLIDLSLEIEDV
DSVDTALESFTKVEKIEDSETKFTCEKCQEQVSIEKQLVLDKAPSVAALHLKRFKTDGSL
VEKIDKYVSFPLELDLHAYADNQTDNEEMKYDLYAVIVHIGFSYCSGHYYSFIRSAPNEW
YKFDDSKVVRVREDYVLSQEAYVLFYAKRGTPWFSDFIEGQKPFIDPSIRSTSPKSVLEN
TDAVCVPSPLLPNAQAFCVKESNDAANKSSPSSLNKVHDSDGTENVQMMSTPRPPLGASN
ILDSKSREVDKVSSPSVLKDLSKSVSSVPVLKENCSTLTPGSTSRTLYITPDTPPRSPSP
EIYREDPPDNDYHIPCGHLRTVGQVSCKKQLQKDLEQDMERKQACSLIKKNMPGSRAQQL
LAAMQGSRSEGSANKRRRGMEVSPTRDDSNPTSRRRSSIGSTMRPVMAGSMR
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgctttgctcaaaaaccctagaaaccggttctaatccggttgattttgtaagt
tctgacgaaaccctagataggtcttccccaatttctgctgatcggaatctaccgaatact
gaaaattcagccggtctgaacgaatcggaggagttatgtatggaggaagaagaattggat
gcgtcacctgttcgcacatactctgctccagtttattgtagccgttggggtcaaccttgg
ggtaaaatcaccgactacaagcctttggattcacaaccgactgatgctgagcccgaggat
gagccatcgcctttcgattggacggacggctcttcggaaaataaagttgaaactgagaaa
ttggcgacggttgagtctcagtggaattcgtatagagacgaggaagctaagtttatgcag
ggtgcagggcttgctaatttaggcaatacgtgctttctaaacgcggttttgcaatcgttc
atgcacacagtacctctgattcagggccttcagtcgattgatcacgccacaccatgtact
agttacctgaaggggttctgtgtaatttgtgcgctgagaaagctaattgatgcttcactg
ttttctgaggctggtgtagtctctccctggaagtttgttaacaacttgaactatttttct
tctactttccatcggttccaacaggaagatgctcacgagtttctacagtgtttcctggat
aaacttgaaagatgttgtgatgaatcaagaccaaaagactgccaaactttagagactgac
aacattgtgaagcaggcttttggaggtcgtttagttagcaaattgcggtgttgtaattgt
ggccattgttctgacacatatgagactctaatagatctgagtttagagattgaagatgtc
gacagtgtggacacagctctagagtcattcacaaaggttgagaaaattgaggactctgaa
acaaagtttacatgtgaaaaatgccaggagcaagtctccattgagaagcagcttgtactt
gataaggctccctcggtagcggcccttcatttaaagagattcaaaacagatggttctctt
gttgagaagattgacaaatatgtttcgtttcctcttgaattggacttgcatgcttatgct
gataaccaaactgataatgaagaaatgaagtatgatctttatgcagttatagtgcatata
ggattttcatattgttctgggcactattacagcttcattcgttctgctccaaatgaatgg
tacaaatttgatgactcaaaggttgttcgtgttcgagaagattatgttttatcacaggaa
gcatatgttctattttatgcaaagaggggcaccccttggttttcagattttattgaaggg
caaaagccttttatagatccgtcaatacggagtacttctcccaaatcggttttagagaat
acagatgctgtctgtgttccttctccgcttctgccgaatgcccaagctttctgtgtcaaa
gaatccaatgatgctgcaaataagtcatctcccagttctctcaacaaggttcatgatagt
gacggaacggaaaatgtgcagatgatgtctactcctagaccaccactaggtgcaagtaat
attctggattccaagtcacgtgaagtggataaagtgtcttcaccttcagttctcaaagat
ttgtctaaatcagtttctagtgttccagtactcaaagaaaactgcagtactctgacccct
ggttctaccagcagaactttatatatcacacccgacacaccacctagatctccaagccca
gagatatacagagaagaccccccagataacgattaccatattccttgtggtcatctaaga
acggtaggccaggtttcttgcaaaaagcaactgcagaaagacctagagcaggacatggaa
agaaagcaggcgtgctctctgataaagaaaaacatgcctgggtctagagcccagcaatta
ctagctgctatgcagggttcgcgcagtgaaggttctgctaataagaggaggagaggaatg
gaagtatctccaactagagatgacagtaatcccaccagtcgccgaaggtctagcattggc
tctacgatgcgtcctgtaatggctggcagcatgagataa
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