Streptomyces stoeckheimensis: ACE1OC_08485
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Entry
ACE1OC_08485 CDS
T11171
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ssto Streptomyces stoeckheimensis
Pathway
ssto03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACE1OC_08485 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssto03019
]
ACE1OC_08485 (recQ)
03400 DNA repair and recombination proteins [BR:
ssto03400
]
ACE1OC_08485 (recQ)
Enzymes [BR:
ssto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACE1OC_08485 (recQ)
Messenger RNA biogenesis [BR:
ssto03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACE1OC_08485 (recQ)
DNA repair and recombination proteins [BR:
ssto03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACE1OC_08485 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Helicase_Sgs1
ResIII
Motif
Other DBs
NCBI-ProteinID:
XLF69139
LinkDB
All DBs
Position
complement(1798248..1800323)
Genome browser
AA seq
691 aa
AA seq
DB search
MTTSEAAVEIPDAQQVLHRVFGYDSFRGEQQQIIEHVAGGGDALVLMPTGGGKSLCYQIP
ALVRAGTGVVISPLIALMQDQVDALNALGVRAGFLNSTQLSDDRRAVEQAFLDGELDLLY
LAPERLRTEGTQRLLDRGTVSLFAIDEAHCVAQWGHDFRPDYLALSMLHERWPKVPRIAL
TATATEATHAEIAARLGLEEARHFVAGFDRPNIQYRIVAKNNPLKQLLELIRTEHPGDAG
VVYCLSRASVEKTAAALVEQGIDAVPYHAGMDSRTRAANQSKFLREDGVVVVATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGEPATAWLAYGLQDVVQQRKMIEGSEGDE
AHRRALAGHLEAMLALCETVGCRRVRLLAYFGQTGAPDCGNCDTCLTPAESWDGTVPAQK
LLSTVWRLAKERRQKFGAGQIIDILQGKKTAKVIQFDHDGLSVFGIGADLGTTEWRGVVR
QLLALGLLAVEGDYGTLVLTEASGEVLGGRRSVPMRKETAPPAGSSRRESGGSRSGKGGR
VPVDLPAAAVPAFESLRAWRAETAKEQGVPAYVVFHDATLREIATQLPGTVAELGTISGV
GEAKLAKYAEGILRTLGGAQPEPGAGDPEAATAVAPATAPPTARAAAAPAARAVAAASVA
VPAQSPPAPRAEESLFGPEDEDIDPPWDDWE
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttccgaggcagccgtcgagatccccgacgcccagcaggtgctccaccgcgtc
ttcgggtacgactcgttccgcggtgagcagcagcagatcatcgagcacgtggccggtggc
ggcgacgcgctggtgctgatgcccacgggcggcggcaaatcgctctgctaccagatcccg
gccctggtcagagcgggcaccggagtggtgatctccccgttgatcgccctgatgcaggac
caggtggacgccctcaacgcgctcggagtgcgggccgggttcctcaattcgacgcagctg
tccgacgaccggcgcgcggtcgagcaggccttcctcgacggcgagctcgacctgctctac
ctggcacccgagcggctgcgcaccgaagggacgcagcggctgctcgaccggggcacggtc
tcgctcttcgccatcgacgaagcgcactgcgtcgcccagtggggccacgacttccggccc
gactacctcgcgctgtccatgctgcacgagcgctggccgaaggtgccccggatcgcgctg
accgcgacggccaccgaggccacgcacgccgagatcgcggcgcgcctcggcctggaggag
gcccgccacttcgtggccggcttcgaccggccgaacatccagtaccggatcgtggcgaag
aacaacccgctcaagcagctgctggagctgatccgcaccgagcaccccggggacgccggg
gtcgtctactgcctctcgcgggcctcggtggagaagacggccgccgccctggtcgagcag
ggcatcgacgccgtgccctaccacgcgggcatggactcccggacgcgcgcggccaaccag
tcgaagttcctgcgcgaggacggggtcgtggtggtggccacgatcgcgttcggcatgggc
atcgacaagccggacgtgcgcttcgtggcccacctggacctgcccaaatcggtcgagggc
tattaccaggagaccggccgtgccggccgcgacggggaaccggccacggcctggctggcg
tacgggctccaggacgtggtgcagcagcgcaagatgatcgagggctccgagggcgacgag
gcgcaccgccgcgcgctggccggacacctggaagcgatgctcgcgctgtgcgagacggtc
ggctgccggcgggtgcggctgctggcgtacttcgggcagaccggcgcgccggactgcggg
aactgcgacacctgcctgacgcccgccgagtcctgggacgggacggtcccggcgcagaaa
ctgctgtccacggtgtggcggctggccaaggagcggcgccagaagttcggcgccggccag
atcatcgacatcctgcagggcaagaagaccgccaaggtcatccagttcgaccacgacggg
ctctcggtgttcggcatcggggcggacctgggcaccaccgaatggcgcggggtcgtgcgg
cagctgctggcgctcggactgctggccgtcgaaggcgactacggcacgctggtgctgacc
gaggccagcggcgaggtgctgggcgggcgccggagcgttccgatgcgcaaggagacggcg
ccgccggccggttcctcccgcagggagtccggcggatcgcgctccgggaagggcggccgc
gttccggtcgacctgccggcggccgccgtaccggcgttcgagtccctccgtgcgtggcgt
gccgagaccgcgaaggagcagggcgtgccggcgtacgtcgtcttccacgacgcgacgctg
cgggagatcgcgacccagctgcccgggacggtcgcggaactgggcacgatcagcggtgtc
ggcgaggcgaagctcgccaagtacgccgagggcatcctgcggaccctgggcggcgcgcag
cccgagccgggcgcgggggacccggaggcggcgaccgcagtcgccccggcgaccgccccg
ccgaccgcccgagcggcggcagctccggccgcccgggccgtggcggccgcctccgtcgct
gtgcccgcgcagtccccgccagccccccgggcggaggagtcgctcttcggcccggaggac
gaggacatcgacccgccctgggacgactgggagtag
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