Streptomyces stoeckheimensis: ACE1OC_27725
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Entry
ACE1OC_27725 CDS
T11171
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
ssto Streptomyces stoeckheimensis
Pathway
ssto02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ssto00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ACE1OC_27725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssto03021
]
ACE1OC_27725
Transcription machinery [BR:
ssto03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACE1OC_27725
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_28
LexA_DNA_bind
KORA
Motif
Other DBs
NCBI-ProteinID:
XLF72628
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Position
6116361..6117509
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AA seq
382 aa
AA seq
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MRCTRPRSPVEVAPVQTQSLTVTVSPPAEVPAAEEPEPEAEADAMHEEEADEAAELEGPE
LLEKVPPPRKRTAEGSGGAGPSADLFRQYLREIGRIPLLTAVEEVELARRVEAGLFAEEK
LGSGAPLDLQLTLDLDKLVVMGRMAKRRLIESNLRLVVSVAKRYVGRGLTMLDLVQEGNL
GLIRAVEKFDYARGYKFSTYATWWIRQAMSRALADQARTIRVPVHVVELINRVVRVQRRM
LQERGYEPTAEEVAVHLELTPERVLEVLRLAQEPVSLHAPVGEEDDVALGDLIEDGDAAS
PVESAAFFLLREHLEAVLSTLGERERKVVQLRYGLADGRPRTLEEIGRIFGVTRERIRQI
ESKTLNKLRDHAFADQLRGYLD
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
gtgcggtgcacccgtcctcggagccctgtggaggtcgcccccgtgcagacccagagcctg
accgtcaccgtcagcccgcccgccgaagtgcccgcggccgaagagcccgagcccgaggcc
gaggccgacgccatgcacgaggaggaggccgacgaggctgcggagttggagggcccggag
ctgctggagaaggtgcccccgccgcgcaagcgcacggcggagggctccggcggagcggga
ccgtccgccgacctcttccggcagtacctgcgcgagataggcaggatcccgctgctcacc
gccgtcgaggaggtcgagctcgcgcggcgcgtggaagcgggcctgttcgcggaggagaag
ctcggcagcggagccccgctcgacctgcagctcacgctcgacctcgacaagctcgtcgtc
atgggccgcatggccaaacggcgtctcatcgagtcgaacctgaggctcgtcgtctccgtc
gccaagcgctacgtcggccgcggcctcaccatgctcgacctggtccaggaggggaacctc
ggactgatccgcgccgtcgagaagttcgactacgcccgcggctacaagttctccacctac
gccacctggtggatccgccaggccatgtcccgggcgctggccgaccaggcccgcaccatc
cgggtgcccgtccacgtcgtggagctgatcaaccgcgtcgtgcgcgtccagcgccgcatg
ctccaggagcgcgggtacgaacccaccgccgaggaggtcgccgtccacctggagctgacc
cccgagcgggtcctggaggtgctgcgcctggcgcaggagccggtctcgctgcacgccccc
gtgggcgaggaggacgatgtcgcgctcggcgacctcatcgaggacggggacgccgcctca
ccggtcgaatcggccgcgttcttcctgctccgcgagcacctggaagcggtgctctcgacc
ctcggggagcgggagcgcaaggtggtccagctgcgctacgggctcgccgacgggcggccg
cgcaccctggaggagatcggccggatcttcggggtgacccgggaacggatccgccagatc
gagtccaagaccctcaacaagctccgcgaccacgccttcgcggaccagctgcgcggctat
ctggactga
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