Streptococcus suis 05ZYH33 (serotype 2): SSU05_0095
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Entry
SSU05_0095 CDS
T00514
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit/40 kD subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ssu
Streptococcus suis 05ZYH33 (serotype 2)
Pathway
ssu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ssu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SSU05_0095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssu03021
]
SSU05_0095
03400 DNA repair and recombination proteins [BR:
ssu03400
]
SSU05_0095
Enzymes [BR:
ssu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SSU05_0095
Transcription machinery [BR:
ssu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SSU05_0095
DNA repair and recombination proteins [BR:
ssu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SSU05_0095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Mg_chelatase_C
DUF7412
Motif
Other DBs
NCBI-ProteinID:
ABP89067
UniProt:
A4VSH8
LinkDB
All DBs
Position
85777..86715
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPTITKIDENKDYGRFVIEPLERGYGTTLGNSLRRVLLASLPGAAVTSIKIDGVL
HEFDTVPGVREDVMQIILNIKGIAVKSYVEDEKKIELDVVGPAEVTAGDILTDSDIEIVN
PDHYLFTIADGATFKAVLTVNSGRGYVPAEDNKKDDAPVGTLAVDSIYTPVKKVNYQVEP
ARVGSNDGFDKLTLEINTNGTIIPEDALGLSARILMEHLGLFTDLTEVAKSAEVMKEAEV
ASDDRMLDRTIEELDLSVRSYNCLKRAGINTVFDLTEKTEPEMMKVRNLGRKSLEEVKVK
LADLGLGLKKDK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtttgaaaaaccaacaataacaaaaattgatgaaaataaagattacggcaga
tttgtaatcgaaccattagaacgtggttacggtacaactcttggtaactctcttcgtcgt
gtacttcttgcctcacttccaggtgctgcagtaacatcgattaaaattgatggtgtactc
cacgaattcgacacagttccaggtgttcgtgaagatgttatgcaaattattcttaacatc
aaaggcattgctgtaaaatcttatgtcgaagacgaaaagaaaattgaacttgatgtagta
ggtccagctgaagtaacagcaggagacattcttacagatagtgacattgaaattgtaaac
cctgaccattatctctttaccattgctgatggtgccacttttaaagctgttttgactgtc
aattcaggtcgtggttatgtaccagctgaggataataagaaagatgatgcaccagtggga
acacttgctgtagattctatctatacgccagtgaagaaagtcaattatcaagttgaacca
gctcgtgttggtagcaacgatggttttgacaaattaacacttgaaatcaacacaaatggc
accattattccagaagatgctttaggtctttctgcacgtattttgatggagcacttaggt
ctcttcactgacttgactgaagttgcaaaatctgcagaagtgatgaaagaagctgaagtg
gcttcagatgatcgtatgcttgatcgtacgattgaagaattggatctatctgttcgctca
tataactgtctgaaacgtgcaggcattaacactgtattcgacttgacagagaaaactgag
ccagaaatgatgaaagtgcgcaatcttggtcgcaagagtcttgaagaagttaaagttaaa
ttggctgatcttggtctaggattgaaaaaagataaataa
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