Streptococcus suis 05ZYH33 (serotype 2): SSU05_0755
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Entry
SSU05_0755 CDS
T00514
Name
(GenBank) ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ssu
Streptococcus suis 05ZYH33 (serotype 2)
Brite
KEGG Orthology (KO) [BR:
ssu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssu03400
]
SSU05_0755
Enzymes [BR:
ssu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SSU05_0755
DNA repair and recombination proteins [BR:
ssu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SSU05_0755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
DUF2059
AAA_30
ResIII
AAA_7
AAA_16
AAA_22
PIF1
Motif
Other DBs
NCBI-ProteinID:
ABP89721
UniProt:
A4VUD2
LinkDB
All DBs
Position
739784..743467
Genome browser
AA seq
1227 aa
AA seq
DB search
MDGTNERRSGLMAFEQFLSAEEIKAVQLAEAHSDKQQKRTAEQIEAIYTHGQNVLVSASA
GSGKTFVMVQRILDKLKRGIGIDQLFISTFTVKAAGELKERIEKKLNETIAETTDMELRR
HLSAQLADLTKADIGTMDSFTQKLVTTYGYSLGISPQFRILQDETEKASLKKEVFDQLFA
DYLEEDENGAFRKLVRNFSGNRKDNSGFRQVVYQVHDFSQSTSSPTKWLKEQAVQADLYS
QERIEQMLEQGFKEKVLDKLYQAADFFRYHVEWGRNDFGSAKYFANVEEVLDLLTGLDSL
DQKDLMERVERILLINNQSRGKGLTNANRPKDEHLIAFKEEYNAGKSQIISELRDLGQEV
YELTLLKDYQVQALPLLILLRDFVLDFSQAYLDVKIKEAAFEFGDIGHFAIRILEENADI
RQFFQEKYHEVMVDEYQDNNHSQERMLDLLSNGHNRFMVGDIKQSIYRFRQADPMIFQEK
FELYQANPQSGKLILLKENFRSQIEVLEATNAIFTRLMDRQVGEIKYDDTHSLVAGSPGQ
KIAQPKNEMEYLIYDQQDSANSSTDAEEETPLTAGEIEVVAKEIIRLHNEEGADFKDITL
LVQKRTHNDLIMSIFEKHGIPIVADGGAASYLQSLEVMIMLDTLRVINNPLNDYALVALL
KSPMFRFDEDELTRISLQAGTGFFYQKMEIAQQASGQHPELMSEKLKKKITDFLSILENW
RAYAKLHSIYDMIWKMFNEKFYYDYVGALPNGSKRQANLYALGLRANQFEKTGYKGLSRF
IAMIDRALANDKDLADVQEFLPQNAVQLMTIHKSKGLEFKYVFLMNIDKRFNLEDHYQSV
IISRKNGLGIQYLADMKDKVNSPLPQVRVLMNTLPYQNNLQELKIANLSEQMRLLYVALT
RAEKKLYLVGKGNADKLAEKYDGKKENGVLAQSTRESMATFQDWILAIDEAFSGEDLHFK
KVFVTDEDLTEEKIGKLTLKSKLEDASLKDIRQSEDIAQALDQLSSVQELNERYKAAIEL
PSLRTPSQIKKLYEPILEQEGMEVMEKYQPKRTFNLPDFSKKPKITGAQVGSAVHELMQR
LDLSWLVTEDTVRAALEAVHAEQAIKDKINVQMILDFFDTDLGREILANTDKLHREAPFA
SLQTDSVSQENFVLRGIIDGYLLYDDHIVLFDYKTDKYDQPIQLSQRYQAQMQLYAEALK
KAYKIDRVDCHLILLGGERIEVVEVNI
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
ttggatggaacgaatgaaaggaggtcaggactaatggcttttgaacaatttttaagcgcg
gaagaaatcaaggctgtgcagctggcggaagcccattctgataagcagcaaaaacgcaca
gctgagcagattgaagctatctacacgcacggtcagaatgttctggtctctgcatcggct
gggtcaggaaagactttcgtcatggttcaacggattttggataagttgaagcgtggtata
gggattgaccagctctttatctcgacctttacagtcaaggcggctggtgaattgaaggag
cggattgagaaaaagctcaatgaaactattgcggagacgaccgatatggaattgcgtcgg
catttgtcggcccagttggcagatttgactaaggcggatattgggaccatggactccttt
acgcagaaattggtgaccacctatggttatagccttggtatttctccgcagtttcggatt
ttacaggatgagactgaaaaagcgagtctgaaaaaagaggtttttgaccagctctttgca
gattatcttgaagaggatgaaaatggtgcattccgcaaactggttcgcaatttttcgggc
aaccgcaaggataatagtggtttccgtcaggttgtttatcaggtgcatgattttagccaa
tcgacgagcagtccaactaaatggctgaaagaacaggctgttcaagctgatttgtacagt
caagagcgtatagagcagatgctagagcaaggctttaaggaaaaagtgttagacaagctc
tatcaagctgcagatttcttccgctaccatgtggaatggggcagaaatgactttgggtct
gctaaatattttgcaaatgtggaagaagtcttggatttgttgacaggtttagatagtctg
gaccagaaggacttgatggaacgggttgaaagaattcttctcatcaataatcagtccaga
ggcaagggcctgaccaatgccaatcgaccaaaagatgagcatttgatagcctttaaagaa
gaatacaatgctggtaagagccagattatctcagaactacgagatttgggtcaggaagtt
tatgaattgaccctgctgaaagactatcaggttcaagctttgccactactgatattatta
cgtgactttgtcttggatttttcgcaggcttatctggatgtcaaaatcaaggaagcagcc
tttgaatttggcgacattgggcatttcgctattcgtattttagaagaaaatgcggacatt
cgccagtttttccaagagaaatatcacgaagtcatggtggacgagtaccaggataacaac
catagccaagagcgaatgctggacctgctgtctaacggtcacaaccgctttatggtgggt
gatattaagcagtccatctatcgattccgtcaggcggatccgatgattttccaagagaaa
tttgaactgtatcaggcaaatcctcagtctgggaaattgattttgctcaaggaaaatttc
cgtagtcagattgaagtcttggaggcaacaaatgctattttcacgcgcctgatggaccgt
caagtaggggaaatcaagtatgacgacacccacagtctagtggctggtagtcctggtcaa
aaaattgcccagcccaagaatgagatggaatacttgatttacgatcagcaggatagcgca
aactcttcaacagatgctgaggaagaaacacctctgactgctggtgaaattgaggtcgtt
gcaaaagagattattcgtcttcacaatgaagaaggagcagacttcaaggacatcactctc
ttggtacaaaagcggacgcacaatgacctcattatgtccatttttgaaaaacatgggatt
ccaattgtggcagatggcggagcagcctcctatctgcaatctttagaagtcatgatcatg
ctggataccttgcgggttatcaataatccactcaatgactatgccttggttgccctgctt
aaatcacctatgttccgattcgatgaagatgaactgacacggatttccttgcaggccggg
acaggtttcttttaccagaaaatggaaatagcccagcaagcaagtgggcaacatcctgaa
ctgatgtcagaaaagttgaagaagaaaatcacggatttcttgtctattttggaaaattgg
cgtgcctatgccaaactgcattctatttatgacatgatttggaagatgttcaatgaaaaa
ttctactatgactatgtcggtgcgcttccaaatggcagcaagcgtcaggccaatctatac
gcacttggtctgcgtgccaaccagtttgaaaaaacaggctacaagggattgtctcgcttc
atcgccatgattgatcgtgccttagcaaatgacaaggacttggcagatgtacaagagttt
ctaccgcaaaatgctgtacagcttatgactattcacaagtcaaaaggtttggagttcaag
tatgtcttcctcatgaacatcgataagcgatttaacttggaagaccattaccaatcagtc
atcatcagccggaaaaatggtctaggtatccaatatttagcagatatgaaagataaggta
aatagcccattacctcaggtgcgagtcttaatgaacaccctcccttatcaaaataatctc
caagagctaaaaattgccaatctttcggaacaaatgcggttgctttatgttgcactaaca
cgtgctgagaagaagctgtatctggttggaaagggtaatgctgacaagttagctgaaaaa
tacgatggcaaaaaggaaaatggcgtactagcccaatcaactcgtgaaagtatggcgacc
ttccaagactggattctagccattgatgaggccttctcaggagaagacttgcacttcaag
aaagtctttgtgacggatgaggatttgacagaggagaagattggtaaacttacattgaag
agtaagctagaagacgccagccttaaagatattcgtcaatcagaagacatcgcccaggcc
ttggaccagttgtcttctgtccaagagttgaacgaacgctataaggctgctatagaattg
ccaagtttacggactccaagtcaaatcaagaagctctatgagcctattttggaacaagaa
ggcatggaagttatggaaaaataccagcccaaacggaccttcaacttgccagatttctcc
aagaaaccaaaaatcactggagcccaagtcggttcagcagtgcatgaactcatgcaacgc
ttggatctgtcttggttggtgacagaagatacggtaagagcagccctagaagctgttcat
gctgagcaagcgattaaagataaaatcaatgttcagatgattttggatttctttgataca
gacttaggaagagaaattctagccaatacggacaaactccaccgagaagctccatttgca
agtttgcagacagattctgtatctcaggaaaactttgtccttcgtgggattatcgatggc
tacctactgtatgatgatcatattgtcctctttgattacaagacagacaaatatgaccaa
ccaatccaactcagccaacgttaccaagctcaaatgcaactctatgcggaggcattgaaa
aaagcctacaagatagatcgtgtagactgccatttgattttgcttggtggggagagaata
gaagtggtcgaagtcaacatatag
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