Streptococcus suis 05ZYH33 (serotype 2): SSU05_0934
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Entry
SSU05_0934 CDS
T00514
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ssu
Streptococcus suis 05ZYH33 (serotype 2)
Pathway
ssu03420
Nucleotide excision repair
ssu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SSU05_0934
03430 Mismatch repair
SSU05_0934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssu03400
]
SSU05_0934
Enzymes [BR:
ssu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SSU05_0934
DNA repair and recombination proteins [BR:
ssu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SSU05_0934
MMR (mismatch excision repair)
Other MMR factors
SSU05_0934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PhoH
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ABP89900
LinkDB
All DBs
Position
complement(907006..908550)
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AA seq
514 aa
AA seq
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MRKNYLEILTMVKSDDWFPKGVIKLEDAALEVVKDVTNSLVIAGPGAGKTELLAQKLDYL
FSTNKCISPKKILALSFKTDAAANLKDRVKKRYGDEYASRFTSLTYSAFEKRILDQFRDV
LPEDIRPSRDYLIEDWDTIKELLSMNGINVNGWRMSDIRNFVENIILNDGNTHKLKKDLL
KGTQDNKPVLLYRQITKLSTQIIATNEYIRKALQMTYDFVFLDEFQDTTYAQYNLLKTCF
LGSSCKLTAVGDNKQAIMRWAGAKPDIFPDYIRDFNSNEYQLLMNHRSVPKLVKFQKEVH
QILNSNHSSIQPNNYPEFQEGEITLFEFENESLEAELIANDIESKIQGGIRPSEICILAK
QKVDDYSSKLITTLNSKGIKARIENEYQELLKDPTCNLLLDLISCSQGKRDPLIWENISN
FYGNINGIDEFTDELILAKSYKEIDNIVSDITYLISNFIPNEESMLNLIDCIIEKIDEKR
IISNFSTYNGKSDLDIIVKNFSMLLYKEYSQTQG
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
gtgcggaagaattacttggagatattgactatggtgaagagtgacgattggtttcctaaa
ggagtcattaaattagaggatgctgctttagaagtagttaaagatgttactaacagtcta
gtcattgctggaccaggtgctggaaaaacagaattactggctcaaaagttagactatctt
ttttctacaaataaatgtatttctccaaaaaagattttagctttaagttttaaaacagat
gctgctgcaaatttgaaagatagagttaaaaaacgttatggtgatgaatatgcttctcgt
tttacctcattaacctattcggcttttgaaaagagaattttagaccaatttagagatgtt
ctacctgaggatatacgaccatcaagagattatttgattgaagattgggatactataaaa
gaactactctctatgaatggaattaatgttaatggatggaggatgtcagatataagaaat
tttgtcgaaaatattatacttaatgacgggaatactcacaaattaaaaaaggatttacta
aaaggaacacaagataataagccggtcctcttgtataggcaaataacaaagttgagtact
caaataatagctactaacgaatacatccgtaaagcacttcaaatgacatacgattttgta
tttctagatgaatttcaggatactacatatgcccagtataatttattaaaaacttgtttt
ttaggttcgtcttgtaaattaacagcagttggagataataagcaagccattatgagatgg
gcaggtgcaaaacctgatatttttccagactatattcgagactttaattcaaatgaatat
caattgttgatgaatcaccgctctgtacctaaacttgtaaaatttcaaaaagaggttcat
cagatattaaatagtaatcacagttctattcagccaaataattatccagaatttcaagag
ggtgaaataacattatttgaatttgaaaatgaaagtttagaagctgagttaattgcaaat
gatatagaatcaaaaattcaaggaggtatacgaccatcagaaatctgtatcctagcaaaa
cagaaggttgatgattatagttcaaaattgataactacattaaacagtaaagggattaaa
gcaagaattgaaaatgaatatcaagagcttttaaaagaccctacttgtaacctattatta
gatttaatatcatgcagtcaaggaaaacgagatcctttaatttgggaaaatattagtaat
ttttatggaaatatcaatggaatagatgagtttactgatgaattaattttagcaaaatcc
tataaggagattgacaatatagttagtgatattacttacctaatttcaaattttattccc
aatgaagaaagtatgctaaatttaattgattgtattattgaaaaaatagatgaaaaaaga
attatttccaacttttcaacatacaatggaaaaagtgacctagatatcattgtcaagaat
ttttcaatgttattatacaaagaatattctcaaacacaagggtga
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