Streptococcus suis 05ZYH33 (serotype 2): SSU05_0985
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Entry
SSU05_0985 CDS
T00514
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ssu
Streptococcus suis 05ZYH33 (serotype 2)
Brite
KEGG Orthology (KO) [BR:
ssu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssu03032
]
SSU05_0985
03400 DNA repair and recombination proteins [BR:
ssu03400
]
SSU05_0985
Enzymes [BR:
ssu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SSU05_0985
DNA replication proteins [BR:
ssu03032
]
Prokaryotic type
DNA Topoisomerases
SSU05_0985
DNA repair and recombination proteins [BR:
ssu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SSU05_0985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF2996
Toprim_4
HypA
Motif
Other DBs
NCBI-ProteinID:
ABP89951
LinkDB
All DBs
Position
complement(963320..965461)
Genome browser
AA seq
713 aa
AA seq
DB search
MRFCCEVGDSGKVGEWLQDKLVRKKQQTKKNLVIVESPAKAKTIEKYLGKNYKVVASVGH
IRDLKKSSMSIDFDNNYAPEYINIRGKGPLINSLKKEAKNAKQVFLASDPDREGEAISWH
LAHILGLDANDKNRVVFNEITKDAVKNAFQEPRAINHDLVDAQQARRVLDRIVGYSISPI
LWKKVKKGLSAGRVQSVALKLIIDRENEISNFKPEEYWTIDATFKKGSKKFQASFYGIDG
KKTKIENNEQVKEILARLDGDDFLVEQVERKERKRNAPLPYTTSTMQMDAANKINFRTRK
TMMVAQQLYEGVSLGTGGTQGLITYMRTDSTRISPVAQAQAADFITERIGATYSKHGNKV
QKCPVVHKMPTKPFVHQMFNLTPESIAKYLDKDQLRLYTLIRNRFVASQMAAAVFDTMSV
RLGQNGVIFAANGSQVKFDGYMAVYNDSDKNKMLPDMEQGDTVVRTSTNPEQHFTQPPAR
YSEATLIKTLEENGVGRPSTYAPTIETIQKRYYVKLAAKRFEPTELGEIVNKLIVEFFPD
IVNVKFTADMEQKLDDVEIGKEQWQKVIDGFYQPFKVELFKAEEQMEKIQIKDEPAGFDC
DVCGHEMVIKLGRFGKFYACSNFPDCRNTKQITKEIGVTCPVCQQGQVIERKSKRNRLFY
GCDRYPECEFTSWDKPVGRACPKCDHYLVEKKVRGGGKQVVCPNGDYEEDKIK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
gtgagattctgttgtgaggttggggatagtggtaaggtaggagaatggctacaggacaag
ttagtaaggaagaaacaacaaaccaagaaaaatctcgttattgtagagtcacctgctaag
gcaaaaacaatcgaaaaatatcttggtaaaaattataaggtcgttgcttcagtcgggcat
attcgagatttgaagaaatctagtatgtctattgactttgataacaactatgcacctgag
tacatcaacatacgtggaaaaggaccactcatcaattctttgaaaaaagaagcaaaaaat
gctaagcaagtctttctcgcgagtgacccggaccgcgaaggagaagcaatttcttggcat
ttggctcacattttgggattggacgcaaacgataaaaaccgtgttgtctttaatgaaatt
acaaaagatgcagtaaaaaatgcttttcaggagccgcgcgctatcaatcatgacttggta
gatgcccagcaagctcgtcgcgtcttagaccgtattgtagggtactccatatcacctatt
ttatggaagaaagtcaaaaaaggtctgtcagcaggacgtgttcaatcggttgctctcaaa
ttaataatcgaccgtgaaaatgaaatcagcaatttcaaaccagaagaatattggacaatt
gatgcaaccttcaaaaaggggagcaagaaattccaggcttctttctacggtatagatgga
aagaaaactaaaattgaaaacaatgagcaggttaaagaaattctcgcccgacttgatggg
gatgatttcttagtagaacaggttgagcgtaaggaacgcaaacgaaatgcacctctgcct
tacacaacttctactatgcagatggatgcggctaataaaatcaatttccgtactcgtaaa
accatgatggttgcccaacaactttatgagggtgtcagtcttggcacaggtggtacccaa
ggtttgattacctatatgcgtacggattcaacacgtattagccctgtagcacaagcacaa
gctgctgactttatcacggagcgtattggtgctacctattcaaagcatggtaataaagta
caaaaatgtccagtggtgcacaagatgcccacgaagccattcgtccatcaaatgtttaac
ttaacacctgaatcaattgcaaaatatctggacaaggaccagttgcgactatatacactg
attcggaatcgttttgtcgcaagtcagatggctgcagcggtctttgataccatgagtgtt
cgtctaggtcaaaatggagtgatttttgctgccaatggtagccaagttaaatttgatggt
tacatggcagtctataatgattctgacaagaataagatgttgccagatatggagcaaggt
gatacagttgtacgtacatcaacaaatcctgaacaacattttacgcagccaccagctcgc
tattctgaagctactttgattaagactttggaagaaaatggtgttggtcgtccgtcaacc
tatgcaccaaccattgaaaccattcagaaacgctactatgttaagttagctgctaagcga
tttgaaccgactgaactcggcgaaatcgttaataagctgattgttgaattcttcccagat
attgtcaatgtcaaatttacagccgatatggaacaaaaattggatgatgtagaaatcggg
aaagagcagtggcagaaggtcattgatggtttctatcagccattcaaggtagaattattt
aaggcagaagaacagatggaaaaaatccaaattaaggatgaaccagctggctttgactgt
gatgtttgtggacatgaaatggtcattaaactaggtcgttttggaaaattctatgcttgt
agtaatttccccgattgccgcaataccaagcaaattaccaaggagatcggcgtaacttgc
cccgtgtgtcaacaaggccaggtcattgaacgaaagagcaaacgcaatcgacttttctat
ggttgtgaccgttatccagagtgtgaatttacctcatgggataaacctgttggtcgtgcc
tgtccaaaatgtgaccactatcttgtcgagaaaaaagttcgtggtggtggtaaacaagtt
gtctgtccaaatggtgactacgaagaagacaagattaaataa
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