Streptococcus suis 05ZYH33 (serotype 2): SSU05_1378
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Entry
SSU05_1378 CDS
T00514
Name
(GenBank) DNA polymerase I - 3'-5' exonuclease and polymerase domain
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ssu
Streptococcus suis 05ZYH33 (serotype 2)
Pathway
ssu03030
DNA replication
ssu03410
Base excision repair
ssu03420
Nucleotide excision repair
ssu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SSU05_1378
03410 Base excision repair
SSU05_1378
03420 Nucleotide excision repair
SSU05_1378
03440 Homologous recombination
SSU05_1378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssu03032
]
SSU05_1378
03400 DNA repair and recombination proteins [BR:
ssu03400
]
SSU05_1378
Enzymes [BR:
ssu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SSU05_1378
DNA replication proteins [BR:
ssu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SSU05_1378
DNA repair and recombination proteins [BR:
ssu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SSU05_1378
NER (nucleotide excision repair)
GGR (global genome repair) factors
SSU05_1378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
ABP90344
LinkDB
All DBs
Position
complement(1320183..1322819)
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AA seq
878 aa
AA seq
DB search
MKKNKLLLIDGSSVAFRAFFALYNQIDRFKNANGLHTNAIYGFNLMLDHMMKRIEPTHIL
VAFDAGKTTFRTEMYADYKAGRAKTPDEFREQFPFIRQMLDAMGVKHYELDQYEADDIIG
TLDKMAERTDIPFDVTIVSGDKDLIQLTDENTVVEISKKGVAEFEEFTPAYLMEKMGISP
TQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLTEFGSLDGIYENIDSMKASKMKENLIAD
KEKAFLSRTLATIDTQAPIEIGLDDIVYQGPKVDELGQFYDDMGFKQLRAQLGTTSSQEE
AVLDFQIVTEISPAMLKQDQFFYFEILGENYHREDLVGLAWGDKEKIYVGGPELLDSPVL
RDFLESQTIKTYDFKRGKVLLDRKEIKLPPATFDSRLAKYLLSTVEDNSLTTIANLYGQT
SLVPDEAVYGKGAKLDLPEREIFFPHLARKVQVLIETEEPMLTKLEENQQLDLLFDMELP
LANVLAKMEIAGIKVEAETLKAMQSENEVLIDQLTKEIYELAGQEFNINSPKQLGTILFE
DMGLPLEYTKKTKTGYSTAVDVLERLAPIAPVVSKILEYRQITKLQSTYVVGLQDAILED
GKIHTRYVQDLTQTGRLSSTDPNLQNIPVRLEQGRLIRKAFVPSLENSVLLASDYSQIEL
RVLAHISQDQHLIEAFQQGADIHTSTAMRVFGIEKAEYVTPNDRRNAKAVNFGVVYGISD
FGLSNNLGITRKEAKAYIDTYFERFPGIKNYMETIVREARDKGYVETIYKRRRELPDINS
RNFNVRNFAERTAINSPIQGSAADILKVAMINLDKALTEAGLATRMLLQVHDEIVLEVPV
AELETVKAMVKETMESAISLSVPLIADENEGSTWYEAK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaataaattattattaatcgatggctcttctgtagccttccgtgccttcttt
gcactctataaccaaatcgaccgcttcaagaatgccaacggtctgcataccaacgccatt
tacggcttcaatctcatgctggaccacatgatgaagcggattgagccgacccacattctt
gtggcttttgatgctggaaagaccactttccgtacggagatgtatgcagactataaggca
ggtcgtgccaagactccagacgaattccgtgagcagtttccttttatccgtcagatgttg
gatgccatgggagtcaagcattacgaactggatcagtatgaggcagacgatattatcggt
accttggacaaaatggcagagcggacagacatccctttcgatgtgaccattgttagcggt
gataaggatttgatccagctgactgatgagaacaccgtagtcgaaatttccaagaaaggc
gttgccgaattcgaagaatttaccccagcctacctcatggaaaaaatggggattagccct
actcagtttattgacctcaaggctttgatgggagataagtccgataacattcctggcgtg
accaaaatcggtgaaaaaacaggtctaaaactcctgacagaatttggttctttggatggt
atctacgaaaacattgacagcatgaaggcttctaagatgaaagaaaacctgattgctgat
aaggagaaggccttcctatctcgtacacttgctaccattgatactcaggcaccaatcgaa
attggtctggatgacattgtttatcaaggccccaaggtggatgaactgggacaattttat
gatgacatgggcttcaaacaattaagggctcagttaggtacgaccagctcgcaagaggaa
gcggtgctcgatttccaaatcgtaacggaaatcagccccgctatgctcaaacaagaccag
tttttctattttgaaatcttgggtgaaaattatcaccgagaggatttggttggtttagct
tggggagataaggagaaaatctatgtcggagggcctgagctacttgatagtccagtcttg
cgtgactttttagaaagccaaaccataaaaacctatgactttaagcgtggaaaagttctt
ctcgaccgaaaagagattaagctacctccagctactttcgatagccgtctagccaaatac
ttgctttccaccgttgaggacaattccctaacaaccattgccaacctctatggtcagacc
agtcttgttccagatgaggcagtttatggcaagggtgctaagttagacttgccagaacgc
gagatctttttcccacacttggcacgtaaggttcaggttttgattgagacagaagagccg
atgttgaccaaattagaagaaaatcagcaattagatcttttgtttgacatggagttgcca
ctagcaaatgttttagctaagatggaaattgctggtattaaagtggaagctgagactctc
aaagctatgcaatctgaaaacgaagttttgattgaccagttgaccaaggaaatctatgaa
ctagctggtcaggaatttaatatcaattcgcctaagcagcttgggaccattctctttgaa
gatatgggactaccattggaatataccaagaaaaccaagacaggctattcaacagcagta
gatgtcttagaacgattagcgccaattgcaccagttgtttcaaaaatcttggaataccgt
cagattaccaagcttcaatcaacttatgtagtcggcttgcaggatgccattttagaagat
ggtaagatccatacccgctatgtacaggatttgacacaaacaggtcgtctatcttcaacg
gaccctaacttgcaaaatattcctgttcgtctagaacaagggcgcttgattcgtaaggca
tttgtgccatcgcttgaaaatagtgtccttttggcatcggactattcacagattgaattg
cgcgtcttggctcatatttctcaggaccagcatttgattgaggccttccagcaaggtgca
gatattcacacttcgacagctatgcgggtcttcggtatcgaaaaagctgagtatgtgaca
ccaaatgaccgtcggaatgccaaggctgtaaacttcggtgtcgtctatggtatttcagat
ttcggtttatctaataacttggggattacacgtaaggaagctaaagcctatatcgatacc
tattttgaacgcttcccaggaattaagaattacatggaaaccattgttcgtgaggcacgt
gataaggggtatgtagagacgatttacaaacgccgtcgtgaattaccagatataaactct
cgcaatttcaatgtccgtaattttgcggaacgaacagccatcaactcaccaattcaaggt
tcggccgcagatattctcaaagtagccatgattaatctcgacaaggctttgactgaagca
ggtcttgcgacacgtatgttattgcaagtacacgatgagattgttttggaagtcccagtg
gcagagctagaaacggtaaaagccatggtaaaagagactatggaatcggcgattagcctg
tctgtaccattgattgcggatgaaaatgaaggttcaacatggtatgaagcaaagtaa
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