Streptococcus suis 05ZYH33 (serotype 2): SSU05_1990
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Entry
SSU05_1990 CDS
T00514
Name
(GenBank) Predicted HD-superfamily hydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
ssu
Streptococcus suis 05ZYH33 (serotype 2)
Brite
KEGG Orthology (KO) [BR:
ssu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssu03019
]
SSU05_1990
Messenger RNA biogenesis [BR:
ssu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SSU05_1990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
ABP90956
LinkDB
All DBs
Position
complement(1899382..1900335)
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AA seq
317 aa
AA seq
DB search
MRKIMKINQMKKDEFFEGFYLIKSAEVRQTRAGKDYLALTFQDDTGEIEGKIWDAQPGKI
KDFTAGTVVHMQGRREVYNNTPQVNQLVLRLPKAGEPNDPADFKEKPPVDVKDTKDYLSQ
MIFRIENATWQRIVRALYSKYDKEFYSYPAAKTNHHAFYSGLSFHTATMVRLADKIGDIY
PQLNKSLLFAGIMLHDLAKVIELTGPDNTGYTVRGNLIGHISLIDEEITKVLMELGIDDS
LEEVTVLRHVILSHHGLLEYGSPVRPQIMEAEILHMIDNIDAEMMMMLSALDKVGPGEMT
NRIFAMDNRAFYKPNID
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagataatgaaaattaaccaaatgaaaaaagatgaattcttcgaaggattctat
ctaatcaagtcagcagaagtccgacaaacacgggctggaaaagactacctagctctgacc
ttccaggatgatactggtgagattgaaggcaagatctgggatgcccaaccagggaaaatc
aaggattttactgctggaactgttgttcacatgcaggggcgccgtgaggtttacaacaac
accccccaggtcaatcaactggttcttcgtttgccaaaggcaggcgagcccaacgaccct
gctgatttcaaggaaaaaccacctgtggatgtcaaggacaccaaggactatttgagccag
atgattttccgcatcgaaaatgccacttggcagcggatcgtccgtgctctctacagcaag
tacgacaaggaattctattcctatccagcagccaagaccaatcaccatgccttctactca
ggcttgtccttccatacagcgaccatggtacgcttggcagataaaattggtgacatctat
ccccagctcaacaagagcctgctctttgcaggaatcatgcttcatgacctagccaaggtg
atcgaactgactggtccagacaatactggctacactgtccgtggcaatctgattggtcac
atttccttgattgatgaagagattaccaaggtcttgatggaattgggcatcgatgacagt
ctggaggaagtgactgttctgcgccacgttatcctcagtcaccatgggctcttggagtat
ggaagccctgtccgtccgcagattatggaggcggaaatcctccacatgattgacaacatt
gatgcggaaatgatgatgatgctatcggccttggacaaggtcggcccaggcgagatgacc
aaccgcatctttgccatggataatcgcgccttctataagcccaatatcgactga
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