Sphingomonas suaedae: FPZ54_03245
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Entry
FPZ54_03245 CDS
T07976
Name
(GenBank) poly(beta-D-mannuronate) lyase
Organism
ssua
Sphingomonas suaedae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chondroitinas_B
Beta_helix
NosD
CdsD_PD2
Motif
Other DBs
NCBI-ProteinID:
QDX28080
UniProt:
A0A518RKX5
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Position
677213..679369
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AA seq
718 aa
AA seq
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MGCALVAPAAFAADHLVTTPAAYAQAVKRAAPGDRILLADGVWRDFQIIFAGRGTADKPI
TLTAQTPGKVILSGRSNLRIGGAHLIVSNLVFRDGWSPTKELIALRVDSKTVANNTRLTG
IVVDRFTNPDRRAQDIWVAIYGTDNRVDHSWFAGKGNGGVTLAVIRPKGQPGENRARIDH
NFFGPRPPLGSNGGETIRIGTSDESLSDSKSTVENNWFEGCDGEVEIVSVKSGGNVIRGN
MVVESQGAIVLRHGNGNLVERNIFLGRGKPSTGGIRVINRDQVVRHNYLENVTGTSFLSA
IAVMNGVPNSTVNRYHQVANALIERNTIIDAARITFGAGADAERSAPPVSSRFANNLIYT
ASGKSIVRVDGDASGIAMTGNVQSGPPPKGLAGFVQADIKLVRAANGLLYPADPALAATG
APRDLVMLKREDAGPAWYPKDAPASVGRTLDVAPGALAQAIAASGPGDTIRVAPGIHRVT
VPIPVGHSLTVSGPRTAILESAAPTLFQLTPGGSLYLSGVTLSGAASPTAGRASLIRAPQ
SVSILNYRVTLSDVAVRDAVDVIATTPDTFAEDVAIRRSTFAKVSGAVVAAAAETGSKGL
YSAERITIADSDFTDVATIADVARLGTDESTFGPWFVMTGNRIINDGAVRLSGVQNVAIT
GNRFERAKAIAIANSVGAPVVRITANVFAATPEPTITRLYPQGTPDIVLADNQMEALR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgggatgcgcgttggtggcgcccgctgcttttgccgcggatcaccttgtgacgaccccc
gcggcttatgcgcaggcggtgaaacgggctgcaccgggcgaccgtatcctgctcgccgac
ggggtgtggcgtgatttccagatcattttcgctggccgcggcaccgccgacaaaccgatc
acgctgaccgcgcagacgcccggcaaggtaattctttccggtcggtcgaacctgcggatc
ggcggcgcgcatttgatcgtctccaacctcgtctttcgtgatggctggtcaccgacgaag
gaactgattgcgctgcgcgtcgattcaaaaacggtggcgaacaacactcgccttacaggt
atcgtcgttgatcgcttcaccaatcccgatcgccgcgcgcaggacatttgggtcgcgatc
tacggcaccgacaatcgcgtcgatcacagctggttcgcgggcaagggtaatggcggcgtc
accctcgcggtgatccgccccaaggggcagccgggggagaatcgcgcacgcatcgaccat
aatttctttgggccccgtcccccgctcggctcgaatggcggcgagacgattcgcatcggc
accagcgacgaatcgctgagcgactccaagtcgaccgtcgagaataactggttcgaaggc
tgcgatggtgaggtcgagatcgtctcggtcaaatcgggcggaaacgtgatccgcggcaat
atggtggtcgaatcgcagggcgcgatcgtgctccgccacggcaatggcaatctggtcgag
cgcaacatcttcctcgggcgcggcaagccctcgaccggtggtatccgcgtgatcaaccgc
gatcaggtggtgcggcacaattatcttgagaacgtcaccggcacgtcgttcctcagcgcg
atcgcggtcatgaacggtgtcccgaactcgacggtcaaccgctatcatcaggtcgccaat
gcgctgatcgagcgcaacacgatcatcgacgccgcgcgtatcacgttcggtgcgggcgca
gatgccgaacgcagcgcgccgccggtatcgagccgttttgcgaataacctgatctacacc
gcatcgggcaaaagcatcgtgcgggtcgatggcgacgcatcgggtatcgccatgaccggc
aacgtacagtccggtccgccgcccaaggggctggccggcttcgtccaggccgacatcaag
ctggtccgcgccgccaacggcctgctctatcccgccgatcccgcgctcgccgcgaccggt
gcgccgcgcgatctcgtgatgctcaagcgcgaggacgcaggaccggcgtggtacccgaag
gacgcccccgccagtgtcggacgcacgctcgacgtcgcgcccggcgcgctggcgcaggcg
attgccgcgtccggtcccggcgacacgatccgcgttgcgcctggcatccatcgcgtgacc
gtgccgattccggtcggtcatagcctgaccgtctccggcccgcgcacggcgatcctcgaa
agcgcggcgccgaccctgttccagctgacccccggcgggagcctttacctcagcggcgtc
accctctccggcgccgcctcaccgactgcggggcgcgcttccctcattcgcgcgccgcag
tcggtgagcattttgaactatcgcgtcaccctgagcgatgtcgccgtgcgtgacgccgtc
gacgtgatcgcgactactccggacacctttgccgaggacgtcgcaatccgccgctcgacc
ttcgccaaggtctcgggtgcagtcgtcgccgccgccgccgaaaccggcagcaaggggctg
tacagcgccgaacgcatcaccatcgccgacagcgacttcaccgatgttgcgacgatcgcc
gacgtcgcgcggctcggcaccgatgaaagcaccttcggtccgtggttcgtcatgaccggc
aaccgcatcatcaacgacggggcagtgcgcctgtcgggcgtgcagaacgtggcgatcacc
ggcaaccgcttcgaacgcgcaaaggccatcgccatcgccaacagcgtcggcgcgccggtc
gtccgcatcaccgccaatgtcttcgccgcgacgcccgagccgacgatcacgcgcctctac
ccgcaggggacgccggacatcgtgcttgccgacaatcagatggaggcgctgcgatga
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