Sphingomonas suaedae: FPZ54_03770
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Entry
FPZ54_03770 CDS
T07976
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
ssua
Sphingomonas suaedae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
QDX25230
UniProt:
A0A518RCR4
LinkDB
All DBs
Position
796879..800010
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AA seq
1043 aa
AA seq
DB search
MLTTPIQSRRTRARFTLASALAGTASALLLALPSAALAQEECGAAPATPGTVTCTPAGNP
YPNGVTYIAPPADLTIVLEDGVRIDTTGGFNLGLLAVGDNAFTIDGGTNTLITSDSFGVL
VSNNTDPISVTLDRIVTNGTNNFGLIVSSSEGAITTSTNAITTSGADADGISASTDTGAI
TIRSGSVTTSGENATGIDANSDAGNLNITSGTIRTSGVGGGGFSGGAVGILAQTGGTGTV
TVNSTTIDTAGTDAFGIRAVSNTGAVSVTSGTIGTTGLNADGITVTTAGTATINGGAITT
TGANADGIVASGVTGANINFTSISTTGANANGVLVPAGVQFFGPRATATTTVNGGSVSTV
GATSDGVRAIAGTDTATVNVTGDITTQGANSRGIFATGPMGVAVTNGGTISTAGVTSNGV
DASSTTGPVNVTVNNVTTTGNGSRAVVVNATTGNATATVNGAVRTTGTTADALTVTSGGN
SVVNVGANGSFATTQGNSIVLNSLGSSTLNNAGTIANNANGFALVAIGGPITINNSGNLS
SDIVLTAGADRINNSGTFTVGPNPDFGAGSDSFVNSGLILVGSGAAATVAPTFTGLETMT
NSGTIDLRNGRAGDTLTLPGTYAGANGTLGLDVAFGAAPVADQLVIGGVASGATTIQLNQ
LAGAQPTLNSGIVLVRAATGSDANAFDLAGGSLTSGFVRLEVVFDPATGTYALTGAPSDS
AFRTLNFNEGVRSLWLKSADTVSGQLRARRDALWTQGGGDVAGRTWLQMHGSVETRGGSR
NFNSFGQSRLTNTGYEQDYFGGQIGFDISGGAGERGGFAFGVTGGYINSSMSFAGSSDRL
SFDVINGGVYGSFTSGNVFINAIGKYDYFWAKTNMPGAGFQDDTNGGVYGARAEAGIRFG
SDSFFVEPAASISYVKNDFDDLSLNGTTISFDDDDGLRGRAGGRIGGAFGIGGGAEAAVY
VGGNYVHEFKGRDRVTFTSGGTSLDFTNNRIRDYGEATLGVTIAQSQGISGFIEGNYIRS
FTDSNGTGSIDGAGGRAGIRLQF
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgctcacgacgcccatccagtcgcgacgcacgcgcgcgcgcttcacgcttgcctcggcc
cttgccggaactgcatccgccctgctcctggcattgccgtccgcggccttggcgcaggaa
gaatgcggcgccgcgcccgcgacccccgggaccgtgacgtgcacccctgcaggtaacccc
tatccgaacggcgtcacctatatcgccccacccgccgatctcaccatcgtgttggaggat
ggcgtgcgcatcgacaccaccggcggcttcaatctcggcctactcgcggtcggtgacaac
gcctttacgatcgacggcggcaccaacacgctcatcaccagcgacagcttcggcgtcctc
gtgtcgaacaataccgatccgatttcggtaactctcgaccggatcgtcaccaacggcacc
aataatttcggcctgatcgtcagctcgtcggaaggcgcgatcacgacgagcaccaatgcc
atcaccaccagtggcgccgacgccgacggtatcagcgccagcaccgacaccggcgcgatc
accatccggtcgggcagcgtcacgaccagcggcgagaacgctaccggcatcgacgccaac
agcgatgcgggcaatctcaacatcacctccggcacgatccgtaccagcggtgtcggcggc
ggcggcttcagcggcggcgcggtcggcatcctcgcccagaccggcggcaccggaacggtc
accgtcaactcgaccacgatcgacaccgccgggaccgacgcgttcggcatccgtgccgtg
tccaacaccggcgcggtatcggtaacctcgggaacgatcggcacaaccggcctcaacgct
gacggcatcaccgtcaccacagcgggcaccgcgacgatcaatggcggcgccataaccacc
acgggtgcgaatgccgacggcatcgtcgctagcggcgtcaccggtgccaacataaacttc
acctcgatcagcacaaccggcgccaacgccaatggcgtgctcgtcccggcaggtgtccag
ttctttggcccgcgcgcgactgcaaccaccacggtcaatggcggcagcgtcagcaccgtc
ggcgcaacgtcggacggcgtccgcgcgatcgccggcaccgacaccgcgacggtcaatgtc
accggggacatcacgacccagggtgcgaacagccgcggcatcttcgccaccggcccgatg
ggcgttgcagtcaccaacggcggcacgatcagcaccgctggcgtcacctccaacggtgtc
gatgcgtcgagcacgaccggtccggtcaacgtcacggtcaataacgtgaccaccaccggt
aacggctcgcgcgccgtcgtcgtcaatgcgaccaccggcaatgctaccgcaaccgtcaac
ggcgcagtgcgcaccaccggcaccactgccgatgcgctgaccgtcaccagcggtggcaac
agcgtcgtcaacgtcggcgccaacggctcgttcgccaccacgcagggcaattcgatcgtt
ctgaattcgcttggcagcagcaccctcaacaacgccggaacgatcgccaataacgccaac
ggcttcgcgctcgtcgccatcggcgggccgatcaccatcaacaacagcggcaatctgtcg
tcggatatcgtcctgaccgccggtgcggaccgcataaacaacagcggcaccttcaccgtc
ggcccaaatccggacttcggcgcaggcagcgacagcttcgtcaatagcgggctgatcctg
gtcgggtccggcgcagcagcgaccgtcgccccgacgttcaccggcctcgaaaccatgacc
aacagcggcaccatcgatctgcgcaacggacgcgcgggcgacacgctgactctgccgggc
acctacgcgggcgccaatggcacgctcggcctggatgtcgcgttcggcgcggcaccagtg
gctgatcagctggtcatcggcggcgttgccagcggtgccacgaccatccagctcaaccag
ctggccggagcgcagccgactttgaattcaggcatcgtgctggtccgtgccgcgaccgga
tcggatgccaatgcgttcgatttggcgggcggttcgctcacttcgggctttgtccggctg
gaagtcgtcttcgaccccgccaccggcacctacgcgctgaccggcgcaccaagcgacagc
gccttccgcacgctcaatttcaatgagggcgttcgtagcctctggctgaaatccgccgac
accgtttcgggccagcttcgagctcgccgcgatgcgctgtggacgcagggcggcggcgat
gttgccggacgcacatggctgcagatgcacggttcggtcgaaacccgtggcgggagccgt
aatttcaacagcttcggccagtcgcgcctgactaacaccggctatgagcaggattatttc
ggcggacagatcggctttgacattagcggcggtgccggtgagcgtggtggcttcgccttc
ggggtcaccggcggctatatcaattcgtcgatgagcttcgctggctcgtccgaccggctg
agcttcgacgtcatcaacggcggcgtttatggcagcttcacgtcgggtaacgtcttcatc
aacgcgatcggaaaatacgactatttctgggcgaagacgaatatgcccggcgccggtttc
caagacgacaccaatggcggcgtctatggtgcgcgggcagaggcgggcatccgcttcggc
agcgacagcttcttcgtcgaaccagcggccagcatctcgtatgtgaagaacgatttcgac
gatctgtcgctcaacggcacgacgatcagcttcgatgatgacgatggcctgcgcgggcgc
gccggtggccgcatcggcggtgccttcggcattggcggcggcgcggaagcggcggtctat
gtgggaggcaattacgtccatgagttcaagggccgcgaccgcgttacctttaccagcggc
ggcacgagcctcgatttcaccaacaatcgcattcgcgattatggcgaagccacactgggt
gtgacgatcgcccagagccaggggatcagcggcttcatcgaaggcaactacatccgctcc
ttcaccgacagcaacggtaccggaagcatcgacggcgccggcggccgcgcgggcatccgc
ctccagttctga
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