Sphingomonas suaedae: FPZ54_03960
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Entry
FPZ54_03960 CDS
T07976
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ssua
Sphingomonas suaedae
Pathway
ssua00550
Peptidoglycan biosynthesis
ssua01100
Metabolic pathways
ssua01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ssua00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FPZ54_03960 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FPZ54_03960 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ssua01011
]
FPZ54_03960 (mrdA)
Enzymes [BR:
ssua01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
FPZ54_03960 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
ssua01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
FPZ54_03960 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QDX25265
UniProt:
A0A518RCS1
LinkDB
All DBs
Position
complement(838901..840844)
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AA seq
647 aa
AA seq
DB search
MITDAQQNYSFSRRAMVLGGGQAALGLILAARMTWLSVYENDKYKLMAESNRVNLTLIPP
RRGWIVDRHGVPIANNRTDFRVDIIPDRLEDKDRVLGALRGLLSLTAEDMERITKDLKGA
AGFRPIQVAENLDWERYAAVSVRLPELPGVAPTRGFARNYPAGAAVGHLIGYVGTATQEQ
FKESKDPLLLTPGFKLGKDGVEKTMEDRLRGKPGAKRVEVTARGKLVRELATRPDEPGQT
LRLTIDAGLQEFTARRLGNESGSVTVFDVTNGDILALVSMPSYDPNAFSDGISTTEWKML
SEDDHLPLMNKTFQGLYPPGSTFKPATALAILGAGVDPERVVYCNGGYQLGNRRFGCLGR
HGPMTMHTAIARSCNTYFYTIGREIGIDPIAAAARKLGFGEEFDLPVPSQRYGTVPDTAW
KRRRYKQDWTQADTLNASIGQGYVLVSPFQLALAAARIASSRALLPSLVIGDPRPPLRLD
FPEEHLAIVRAGMDEVVNGRGTAGASRLPLDNIRMAGKTGTAQVRRIMDSNRGQGGEWKY
RDHGLFICFAPVDNPRYAASVVIEHGMGGSRAAAPVAKDVLTWLFDRQKALDSLARFEAE
WGGDIRTRMAAKEAAYRAANGLPPLAPSAAPTPEPAPSATPAAEPAR
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgattaccgacgcgcagcagaactacagcttctcccggcgcgcaatggtcctcggcggc
ggccaggccgcgctgggcctgattctggccgcgcgcatgacctggctctccgtgtacgag
aacgacaaatataagctgatggcggagagcaaccgcgtcaatctcacgctgataccgccc
cggcgcggctggatcgtagatcgccatggcgtgccgatcgccaacaaccgcaccgatttc
cgtgtcgacatcattcccgaccggctggaggacaaggatcgcgtgctgggggcgctacgc
ggcctgctttcgctcacggcggaagacatggagcggatcacgaaggacctgaagggcgcc
gccggctttcgccccattcaggttgccgaaaatctcgactgggaacgctatgcggcggtc
agcgtacgcttgcccgaactgcctggcgtcgcccccacccgcggctttgcgcgcaactat
ccggcgggtgcggcggtcggccatctgatcggctatgtcggcacggcgacccaggagcag
ttcaaggaaagcaaggacccgctgctgctgacccccggcttcaagctcggcaaggacggc
gtcgaaaagacgatggaagaccggttgcgcggcaagcccggcgcgaagcgggtcgaggtc
accgcgcgcggcaagctggtgcgcgaactcgccacccgccccgatgagccgggccagacg
ctgcgcctcaccatcgatgcggggcttcaggaatttaccgctcgccgcctcggcaatgaa
tcgggatcggtgaccgtgttcgacgtcaccaatggagacattctcgcgctggtgtcgatg
ccctcctacgatcccaatgccttttccgacgggatcagcaccaccgaatggaagatgctg
tcggaggacgatcatctcccgctgatgaacaagaccttccagggtctctacccacccggg
tcgacgttcaagccggcgaccgcgctcgccattctgggcgcgggcgtggacccggagcgg
gtcgtttactgcaatggcggctatcagctcggcaatcgtcgtttcggctgtctcggccgt
cacggcccgatgacgatgcacaccgcgatcgcgcgcagttgcaacacctatttctacacc
atcggtcgtgagatcgggatcgatccgatcgcggcggctgcgcgcaagcttggcttcggc
gaagagttcgatttgcccgtcccctcccagcgctatggcaccgtccccgacaccgcgtgg
aaacggcggcgttacaagcaggactggacccaggctgacacgctcaacgcctcgatcggt
cagggctatgtcctggtcagcccgtttcagctcgcgcttgccgccgcccgcattgcgtcg
agccgcgccctgctcccctcgctcgtcatcggcgatcccaggccgccgctgcgcctcgac
ttccccgaggagcatctcgccatcgtccgcgcgggaatggacgaagtggtgaacggccgt
gggaccgctggcgcgtcacgcctgccgctggacaacatccgcatggcgggcaagaccggc
accgcgcaggtacgccggatcatggacagcaatcgcggccagggcggcgaatggaagtat
cgcgaccacggcctgttcatctgcttcgccccggtcgataatccgcgctacgccgcgtcg
gtggtgatcgaacacggcatgggcggctcgcgcgccgcagccccggtggcaaaggacgtg
ctgacctggttgttcgaccggcagaaagcgctggattcgctcgcccggttcgaagccgaa
tggggcggcgatatccgtacccgcatggccgcaaaggaggccgcttatcgcgccgccaac
ggccttcccccgctggctccttccgcagcccccacacccgaacccgccccgtcggcgacg
cccgcagcggagcctgcgcgatga
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