Sphingomonas suaedae: FPZ54_04145
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Entry
FPZ54_04145 CDS
T07976
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ssua
Sphingomonas suaedae
Brite
KEGG Orthology (KO) [BR:
ssua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssua03400
]
FPZ54_04145
Enzymes [BR:
ssua01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FPZ54_04145
DNA repair and recombination proteins [BR:
ssua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FPZ54_04145
Prokaryotic type
FPZ54_04145
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Prim-Pol
Motif
Other DBs
NCBI-ProteinID:
QDX25298
UniProt:
A0A518RCV2
LinkDB
All DBs
Position
876621..877994
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AA seq
457 aa
AA seq
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MPDPTILWFRRDLRLSDQTALIAAAAEGPVIPVFILDDETPKHRAMGGASRWWLHHSLAS
LDADLRDKGSRLILRRGKSDEVLAALAAETGAGRVHCIRHYEPWWRNAERAVGKRLDLVC
HDGNYLAPPGSVTTGAGEPYKIFTPFWRALRERMPPAPPANRPREIAAPSRWPESDRLED
WRLLPTRPNWARGFAEWEPGETGARKRVDAFLRHAARYDEERNMPAIEGSSRLSPHLHFG
EVSPAYVWHRVANAGGSVDVFLAEIGWRDYAQNVILQFPDYGAKNGRERYDRLPWRDFRS
SAVRDEFDAWTKGRTGYPIVDAGMRQLWATGWMHNRVRMIAASFLIKHLLIDWREGDRWF
WDTLVDADYASNAVNWQWVAGTGIDANMWSRIMAPLGQSEKFDAAGYIRHWVPELAGVSD
VAIHDPDAHRCRPRAYPRKIIAHKAARERALEAGRAI
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgatccgacgatcctgtggttccgccgcgatctgcgcctgtccgatcagacggcg
ctgattgcggcggcggcggaggggccggttatccccgtcttcatcctcgacgacgagacg
ccgaagcatcgcgcgatgggcggggcgtcgcgatggtggctgcatcacagcctcgcaagc
ctggacgccgatctgcgcgacaagggatcgcggctgatcctgcggcggggcaagtcggat
gaggtgctggctgcgctcgctgcagagaccggggcggggcgcgtgcactgtatccggcat
tatgagccctggtggcgcaatgccgagagggcggtgggcaaacggctcgatctggtctgc
catgatggcaattatctcgctccgccggggtcggtgacgaccggggcgggggagccgtac
aagattttcactcctttctggcgcgcgttgcgcgagcggatgccgccagcaccgcccgca
aatcgcccgcgtgaaatcgccgcgccatcccggtggccggaatcggacaggctggaggat
tggcgcctgctgccgacccggccgaattgggcgcgtggattcgcggagtgggaaccgggc
gaaacgggcgcgcgcaaacgggtcgacgcatttctgcgccacgccgcacgctatgacgag
gagcgcaacatgcccgcgatcgaggggagttcgcgcctctcaccgcatctccatttcggc
gaggtgtcgcccgcttatgtctggcaccgcgtcgccaatgcgggcgggtcggtggacgtg
ttcctcgccgaaatcggctggcgggactatgcgcagaacgtcattctccagttcccggac
tatggcgcgaagaacgggcgcgagagatatgatagactgccgtggcgcgacttccgctcg
tcggcggtgcgcgacgagtttgacgcctggacgaaggggcgaaccggctatccgatcgtg
gacgcgggaatgcggcagctctgggcgaccgggtggatgcataaccgcgtgcggatgatc
gcggcgagctttctcatcaagcatctgctgatcgactggcgcgagggcgatcgctggttc
tgggacacgctggtcgatgccgattacgcgagcaatgcggtcaactggcaatgggtggcg
gggaccgggatcgacgccaatatgtggagccggatcatggcgccgctcggccagtcggag
aagttcgacgcggcgggctatatccggcactgggtgccggaactggccggcgtgagcgac
gtggcgattcacgaccccgacgcgcatcgctgccgcccgcgcgcgtatccgcgcaagatc
atcgcgcacaaggcggcgcgggagcgagcactggaggcggggcgtgcgatctga
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