Sphingomonas suaedae: FPZ54_05245
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Entry
FPZ54_05245 CDS
T07976
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
ssua
Sphingomonas suaedae
Brite
KEGG Orthology (KO) [BR:
ssua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssua03009
]
FPZ54_05245
Enzymes [BR:
ssua01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
FPZ54_05245
Ribosome biogenesis [BR:
ssua03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FPZ54_05245
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF6494
Motif
Other DBs
NCBI-ProteinID:
QDX25486
UniProt:
A0A518RDI3
LinkDB
All DBs
Position
1084303..1085643
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AA seq
446 aa
AA seq
DB search
MSPSSPQESARQGERIAKLLARAGIASRREIERMIAEGRIALEGQTLTTPATVLTSLHGV
TVDGNPVAAPAPARLFRFHKPAGLLTTERDPAGRPTIYDKLPRGLPRLMPVGRLDLSTEG
LLLMTTDGELKRQLELPATGVERSYRARAYGQVSQEQLEELMLGVEIEGVRYGPINANLE
RRTGANVWIELTLTEGKNREVRRVLEHLGLKVSRLIRTRYGPFHLGDMPVGAADEIRQHD
LIVFRKALTGPGGGKAASNLQLSGKSKAVDAEPEDASAEPAAAPPANRAERRKAGAQPPA
NNREPEAYKPARVQRPKAEKKGPEKFGVAQRRRHQAKTQRQANPAPFSEDLTEGQRRKRP
DTAAGAMRPSRNPRQDAPARTAPPSPKGKPFKEAPAARHAQHDDDAGPLLDRPKRAFRPN
DRRPGTASGKRPPAGKGGPAKQGPRK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtccccttcatccccccaggaatccgcccgacaaggcgagcgtatcgcaaagctgctc
gcccgtgccggaatcgcgtcgcggcgagagatcgaacgcatgatcgccgaagggcgcatc
gcgctcgagggtcagaccctgacgacccctgcgacggtcctcacctcgctccacggcgtc
accgtcgacggcaatccggtcgcggcgcccgcgcccgcccgcctgttccgcttccacaag
cccgccggcctgctgacgaccgagcgcgatcctgcggggcgcccgaccatctatgacaaa
ttgccccgagggctgccccggctgatgcccgtcggccgtctcgacctctcgaccgagggg
ctgttgctgatgaccaccgatggcgaattgaagcggcagctcgaactccccgccaccggc
gtggagcgcagctatcgcgcccgcgcctatggccaggtcagccaggagcagcttgaagag
ctgatgctcggcgtcgagatcgagggcgtccgctacggcccgatcaacgccaatctggaa
cgccgcaccggcgcgaatgtgtggatcgaactgaccctgaccgagggcaagaaccgcgag
gtccgccgcgtcctcgaacatctggggctcaaggtcagccgcctgatccgcacccgctac
ggccccttccatctcggcgatatgccggtcggggcggccgacgaaatccgccagcacgac
ctgatcgtcttccgcaaggcgctgaccggccccggcggcggcaaggccgcctcgaacctc
cagctttccggcaaatccaaggccgtcgatgccgagccggaggacgcatccgcggaaccc
gccgccgcgccgccagcgaaccgcgccgagcgtcgcaaggccggcgcgcagccgccggca
aacaatcgcgagcccgaagcctacaaacccgcccgcgtccagcgtcccaaggcagagaag
aagggtccggagaagttcggcgtggcccagcgccgccgtcaccaagccaagacgcagcgc
caagccaaccccgcgccgttcagtgaggacctgacagaggggcaacgtcgaaagcgaccc
gataccgctgcgggcgctatgcgcccctcgcgcaacccgcgtcaggatgcgcccgctcga
accgctcccccttcccccaaaggaaagccgttcaaggaggcccccgctgcccgtcacgcc
cagcatgacgacgacgccggcccgctgctcgaccggcccaagcgcgctttccgccccaac
gaccgccgccccggcaccgcttcgggaaaacgtccgcccgcaggaaagggcggccccgcc
aagcaaggcccgcgcaaatga
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