Sphingomonas suaedae: FPZ54_06030
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Entry
FPZ54_06030 CDS
T07976
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ssua
Sphingomonas suaedae
Brite
KEGG Orthology (KO) [BR:
ssua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssua03400
]
FPZ54_06030 (addB)
Enzymes [BR:
ssua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FPZ54_06030 (addB)
DNA repair and recombination proteins [BR:
ssua03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FPZ54_06030 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QDX25620
UniProt:
A0A518RDS8
LinkDB
All DBs
Position
complement(1250500..1253442)
Genome browser
AA seq
980 aa
AA seq
DB search
MTTRLNLYTIPPHRAFADALAQGLIRRHGGDPLRLARGVVLVPTNRAKRTITDAFVRASG
GGLLLPRMVAIGDPELDEAAGPFLDPADDDAPIPPAVDPLQRRMILARLIEAHDPSVDAA
EAVRLAGDLGRTLDQMLVEEIAPSALRDVVLLDHLTVHWQRALDLFEIVLEKWPQELEKL
GRIGLAERRNRLLDRVAGRWRAEPPERFVCAAGITTSAPAIARLLRVVAGLPQGQVVLPG
VDLAMADEEWAMLGPFPADPVSGRRRRSLETHPQFHLKLLIDRMGVQRGEFETWRVATEL
DAPPARSKAIASAMMPAERTTLWSDLPAGERRLAGVRALEVATPAEEAQGIALALRQALE
EPGRTAALVTPDRALAKRVAAHCARWGIAIDDSAGSALAIMPPGTLLLALAEAAAQSFAP
MALLALLKHPLVRAGEARIGWLEQVRILDLALRGPRPPAGLAGVTAHLADPEGYDARVRA
RAIDAWAEIAAQLEPIEAAFAAEMVPPATLLAQLREGAERLCGERIWAGVDGRAAAALLD
DLEREAVHGPALIAPASLPALLRTLMDEVAVRPPQGGHPRLAILGVIEARLHAADLLVLG
GLNEGVWPGLPAPDPWLAPRIRSELGLPGLERRIGLAAHDLAQGLGAREVLLTRAKRDAG
APTIASRFWLRLEALSGGLERATELEAWARAIDVPGVHEPVTRPEPCPPVAIRPRSIPVT
DVDRLKADPYAFYAKRMLRLRPLDPVDADPSAAWRGTAVHDALEQWARHDGCDPEALEPR
VLEMLRAAHPMMRALWQPRLIEAVRWIVRETAAHPARRILAVEQEGGVDIAGVRLTGKFD
RIDAMGDGTIGIVDYKTGQPPSTKAVRAGYSLQLGLLGLIAERGGFAGISGRASCFEYWS
LARRNGEFGYVATPVDPAEKYGRMKPEEFVPTAAENFADTAGRYLTGGEAFTAKLHPEYA
PYSDYDQLMRRDEWYGRERR
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccgcctaaacctctacaccatcccgccgcatcgtgcgttcgccgatgcgctc
gcgcaggggttgatccggcggcatgggggcgatccgttgcggctggcgcggggggtggtg
ctggtgccgaccaatcgcgccaagcggacgatcaccgatgcgttcgtgcgggcgagcggg
ggcgggttgttgctgccgcgcatggtggcgatcggcgatcctgaactggacgaggcggcg
gggccgtttctcgatcccgcagacgatgacgcgccgatcccgcccgcggtcgatccgttg
cagcggcgaatgatcctggcgcggttgatcgaagcgcatgaccccagcgtcgatgcggcg
gaggcggtgcggctggcgggggatctggggcggacgctcgaccagatgctggtcgaggag
attgcgccgagcgcgctgcgcgatgtggtgctgctcgatcatttgaccgtgcattggcag
cgtgcgctggacctgttcgagatcgttctggagaaatggccgcaagagcttgagaaattg
ggccggatcggtctggccgagcggcggaatcgcttgctcgaccgggttgcggggcggtgg
cgggcggagccgcctgagcggtttgtctgtgcggcggggattaccacgagcgcgcccgcg
attgcgcggctgctgcgcgtcgtggcggggttgccgcaggggcaggtggtgctgcccggc
gtcgatctggcaatggcggatgaggaatgggcgatgctggggccgttcccggcggacccg
gtgagcggacggcggcggcgcagtctggaaacgcacccgcaattccatctgaagctgttg
atcgaccggatgggcgtgcagcgcggcgagttcgagacgtggcgcgtcgcgacagagctg
gatgcgccgcccgcgcggagcaaggcgattgcgagcgcgatgatgccggccgagcgtacg
accctgtggagcgatttgcccgcgggcgagcgacggctggcgggggtacgcgcgctggaa
gtcgcgaccccggcggaggaggcgcaggggattgcgctggcgttgcgacaggcgctggag
gagccgggacggacggcggctttggtgacgccggatcgcgcgctggccaagcgggtggcg
gcgcattgcgcgcgctggggcatcgcgatcgacgattccgccgggtcggcgctagcgatt
atgccgccggggacgctgttgctggcgctggccgaggcggcggcgcagagctttgcgccg
atggcgttgctggcgctgctcaagcatccgctggtgcgtgcgggcgaggcgcggattggc
tggctggaacaggttcgcatcctcgatctggcattgcgggggccgaggccgcctgcgggc
ttggcgggggtgacagcgcatctggccgatcccgagggctatgacgcgcgggttcgcgcg
cgggcgatcgatgcatgggcggagattgcggcgcagctggagccgatcgaggcggcgttt
gcggcggagatggtgccacccgcgacattgctggcgcaattgcgcgaaggcgcggagcgg
ctgtgcggcgagcggatctgggcgggcgtcgatggccgcgcggcggcggcgttgctcgac
gatctggagcgggaggcggtgcatggtccagcgctgatcgcgccggcgagcctgcctgcc
ttgctgcgcacgttgatggacgaggtggcggtgcgaccgccacagggcgggcatccgcgg
cttgccattctcggtgtgatcgaggcgcggttgcatgccgccgacctgttggtgctgggc
gggctgaacgaaggggtgtggccggggctgcctgcgcccgatccgtggctggcgccgcgc
atccgtagcgagctgggtttgccggggctggagcggcggattggccttgcggcgcatgac
ctggcgcaggggctgggcgcgcgcgaggtgctgctgacacgggcgaagcgcgatgcgggg
gcgccgacgattgcctcgcgcttctggttgcggctggaggcgctgtcgggtgggctggag
cgggcgaccgaactcgaagcctgggcgcgcgccatcgatgtgccgggggtgcatgaacca
gtgacgcggcccgagccgtgtccgccggtggcgatccggccgcgatcgatacccgtcacc
gatgtcgaccggctgaaggccgacccctatgccttttacgccaagcgcatgttgcggctg
cgcccgctcgatccggtcgacgccgatccgagcgcggcgtggcgcggaacggcggtgcat
gacgcgctggagcaatgggcgcggcacgatgggtgtgaccccgaggcgctggagccgcgt
gtgctggagatgctgcgcgcggcgcacccgatgatgcgcgctttgtggcagccaaggttg
atcgaggcggtgcgctggatcgtgcgcgagaccgcggcgcatccggcgcggcgcatcctg
gcggtggagcaggagggcggcgtcgacattgccggcgtgcggctgaccggcaagttcgac
cggatcgatgcgatgggtgacgggacgatcgggatcgtcgattacaagaccggccagccg
ccgagcacgaaggcggtgcgcgcggggtatagtttgcagctggggctgctgggcctgatc
gccgagcgcggcggctttgccggcatttcggggcgggcgagctgtttcgaatattggtcg
ctggcgcggcgcaatggcgagttcggctatgtcgcgacgccggtcgatccggcggagaaa
tatgggcggatgaagccggaggaattcgtgccgacggcagccgagaacttcgccgatacg
gcggggcgctatctgaccgggggcgaggcgttcaccgcgaagctgcacccggaatatgcg
ccctattccgactatgaccagctgatgcgccgggacgaatggtatggccgtgagcggcgc
taa
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