Sphingomonas suaedae: FPZ54_06630
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Entry
FPZ54_06630 CDS
T07976
Name
(GenBank) type IV secretory system conjugative DNA transfer family protein
Organism
ssua
Sphingomonas suaedae
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
QDX25724
UniProt:
A0A518RE80
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Position
complement(1391455..1393062)
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AA seq
535 aa
AA seq
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MIDPKREDLRHGMARWANERDIESAGLFDKDGLFVGYKGNRQMFLRSDSPGIVIAGSGAG
KGRDWLVETIIRGGMHPLLVCDPKGELAAVTISSFLRWNAFVYLWNPTGLHGMASHRCNP
LDLLTFDNPNFHGDCADLAACMIPLVGSGGNHGHHFEKKAREWITALLKSLVERCGHVTF
PMLWRTIQSIRSDAEAWAFQLDAMDHSPFHDVRAAAADMWQAQRHSTSNEFGLILSTIKA
NLSFLNDPVLSASLEYPDFSLRDLTSEQLTSLFLMVPRRYIAQWASVLRVMFVVAMIYKA
RAPQARRLTLLVDEAGQMGRFEELLAAFTIGRGEGVKTIAVFQDVDQISRNFGREAITGF
IGSAQWRCFFGVRDYPTARLLSDMLGSETLEYTDKLQTDAARRLQNEAMRNFMSGGDPAK
AAIDYHHYRDAANARTKMSRLLMTPDEIIGMGDGKMISFISGLDLPPILADKYPYYSTRS
LNGLWLPNPYHPPLDRVRLPGTFGSTERRIITERRPELAHYPQYRDGISYVEGYR
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatcccaaacgcgaagacttgcgccacgggatggcgcgatgggccaatgagcgc
gacatcgagtccgctggcctgttcgacaaggacggcctgttcgtcggttacaagggcaac
cggcagatgttcctgcgttccgacagccccggcatcgtcattgccggatcgggcgcgggc
aaagggcgcgactggctggtcgaaacgatcattcggggcggtatgcatccgttgctggtc
tgcgatccgaaaggcgaacttgctgccgtcacgatcagcagctttctgcgctggaacgcc
ttcgtctatctgtggaaccccaccggcctgcacgggatggcgagtcatcgctgcaacccg
ctcgatctcctgaccttcgacaatcctaattttcatggcgattgcgcggaccttgccgcg
tgcatgatcccgctggtcggcagcggcggcaatcacggccatcatttcgagaagaaggcg
cgggaatggatcaccgcgctgctcaaatcgctagtcgagcgatgcggccatgtcaccttt
ccaatgctctggcgcacgatccagtcgatccgctcggacgcggaagcatgggcctttcag
ctcgatgcgatggatcactccccgtttcacgatgttcgcgccgcagccgccgatatgtgg
caggcgcagcgccattcgacctcgaacgagttcgggctgatattatcgaccatcaaggcc
aacctgtcgtttctcaacgatccggttctttccgcttcgctggaatatcccgacttctcg
ctgcgcgacctgacctccgagcaactcaccagcctgttcctgatggtgccgcgccgctac
atcgcgcaatgggcgtccgtgctgcgcgtgatgttcgtcgtcgcgatgatctacaaggca
agagcgccgcaagcccgacgcctgacgctattggtcgatgaggccggtcagatgggcaga
ttcgaagaattgctcgcagccttcaccatcggtcgcggcgaaggtgtgaaaacaatcgct
gtttttcaagatgttgaccagatttctagaaacttcgggcgggaagccatcacaggattc
atcggttcggcgcaatggcgctgtttcttcggcgtgcgcgattatccgaccgcgcgattg
ctgtccgatatgctgggcagcgagaccctcgaatataccgacaagctccagaccgacgcg
gcgcggcgcttgcagaacgaagcaatgcgcaacttcatgtccggcggcgatcccgcgaag
gccgccatcgactatcaccactatcgtgacgccgccaatgcgcggaccaagatgtcccgg
ctgctgatgacccccgacgagatcatcggcatgggcgatggcaagatgatcagtttcatc
tcaggcctcgatttgccgccgatccttgccgacaagtatccctattactcgaccaggagc
ctcaatggcctatggctgcccaacccttatcatccgccgctggaccgcgttcggctcccc
ggcacgtttggcagcacggagcgccgcatcatcacagagcgcaggccggaactggcgcac
tacccgcaatatcgcgacgggatcagctatgtggagggctatcgctag
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