Sphingomonas suaedae: FPZ54_07375
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Entry
FPZ54_07375 CDS
T07976
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ssua
Sphingomonas suaedae
Pathway
ssua03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FPZ54_07375 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssua03400
]
FPZ54_07375 (xth)
Enzymes [BR:
ssua01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
FPZ54_07375 (xth)
DNA repair and recombination proteins [BR:
ssua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
FPZ54_07375 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
A6_N
Motif
Other DBs
NCBI-ProteinID:
QDX25859
UniProt:
A0A518REL3
LinkDB
All DBs
Position
complement(1545176..1545949)
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AA seq
257 aa
AA seq
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MKIVSYNVNGIKARLPRLIEYLDEQQPDVVCLQELKSADEGFPEADIRAAGYGAVWHGQK
GFNGVAILAKGTDPVERKRGLAGEPEDEHSRYIEAEVNGVVIASIYLPNGNPVPGPKFDY
KLRWIDRLAAHARDLLAEERAVVLAGDYNVIPNDDDVYSVKAMADDALMQPESRQAYRAL
LAQGWTDALRTRFPAGRVWTFWDYQAGAWQRDAGFRIDHLLLSPIAADRFADAGVDKDYR
GREKASDHAPTWARLRP
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
ttgaagatcgtcagctataatgtgaacggcatcaaggcgcggctgccgcgcctgatcgag
tatctcgacgagcagcagccggacgtggtctgccttcaggaactcaaatcggcggatgaa
ggctttcccgaggcagatatccgcgccgcgggctatggcgcggtctggcacgggcaaaag
ggattcaacggcgtcgccatcctcgcaaagggcaccgatccggtcgagcgcaagcgcggc
ctggcgggcgagccggaggacgagcatagccgctatatcgaggcggaggtgaacggcgtg
gtgatcgcgtcgatctatcttcccaacggcaaccccgttccaggacccaaattcgactac
aagctgcgctggatcgaccggctcgccgcccatgcgcgcgacctgctggccgaggagcgg
gcggtggtgctcgcgggcgactataacgtcattccgaatgacgatgatgtctattcggtc
aaggcaatggccgacgacgccttgatgcagccggaatcgcgccaggcctatcgtgcgctg
ctggcgcagggctggaccgatgcgctgcggacccgcttcccggcgggccgcgtctggacc
ttctgggactatcaggccggcgcgtggcagcgcgatgccggctttcgcatcgatcacctg
ctgctcagcccgatcgccgccgatcgtttcgccgatgcgggcgtggacaaggattatcgc
ggccgggaaaaggccagcgatcacgccccgacctgggcgcgtctgcgcccctga
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