Sphingomonas suaedae: FPZ54_12960
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Entry
FPZ54_12960 CDS
T07976
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ssua
Sphingomonas suaedae
Brite
KEGG Orthology (KO) [BR:
ssua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssua03019
]
FPZ54_12960 (rnc)
03009 Ribosome biogenesis [BR:
ssua03009
]
FPZ54_12960 (rnc)
03036 Chromosome and associated proteins [BR:
ssua03036
]
FPZ54_12960 (rnc)
Enzymes [BR:
ssua01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
FPZ54_12960 (rnc)
Messenger RNA biogenesis [BR:
ssua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FPZ54_12960 (rnc)
Ribosome biogenesis [BR:
ssua03009
]
Eukaryotic type
90S particles
RNase
FPZ54_12960 (rnc)
Prokaryotic type
rRNA processing factors
FPZ54_12960 (rnc)
Chromosome and associated proteins [BR:
ssua03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
FPZ54_12960 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QDX26824
UniProt:
A0A518RHB6
LinkDB
All DBs
Position
complement(2746361..2747029)
Genome browser
AA seq
222 aa
AA seq
DB search
MSDSLPGWLTGVLGTAPGDVAMYQRALTHGSQGAVNYERLEFLGDRVLGLTLAEWLYERF
PDEPEGKLSRRFNSLVTGQVCAEVAREIGVASHLRLGKQARDDGASDSDNVLGDVMEALI
GAHFLAHGFAEARALVRRLWDSRIDAQAAAPKHPKSALQEWAAANNRRAPDYELIDRSGP
GHAPRFRVKAVIAKLADAEGEGSSKQEAETAAAAALLERLQK
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgacagcttgcccggctggctgaccggggttctcggcacggctccgggcgacgtg
gcgatgtaccagcgcgcgctgacccatggcagccaaggggcggtcaattacgaacggctg
gaatttcttggcgaccgggtgctggggctgacactggccgaatggctgtatgagcggttt
cccgacgagccggagggcaagctgtcgcgtcggttcaattcgctggtgaccgggcaggtg
tgcgcggaggtggcacgcgagatcggcgtggcgagccatctgaggctcggcaagcaggcg
cgcgacgacggtgcgtcggacagcgacaatgtgctgggtgatgtgatggaagcgttgatc
ggcgcgcattttctggcgcacggtttcgcggaggcgcgcgcactggtgcggcggctgtgg
gacagccggatcgatgcgcaggcggcggcgcccaaacatcccaaatccgcgttgcaggaa
tgggccgctgcgaataatcggcgcgcgccggactatgaactgatcgaccggtccgggccg
ggccatgccccgcgcttccgggtcaaggcggtgatcgccaagctggcggacgccgagggc
gagggcagcagcaaacaggaagccgagaccgcagcggcggcggcgttgctggagcggttg
cagaaatag
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