Sphingomonas suaedae: FPZ54_14430
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Entry
FPZ54_14430 CDS
T07976
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ssua
Sphingomonas suaedae
Pathway
ssua03030
DNA replication
ssua03410
Base excision repair
ssua03420
Nucleotide excision repair
ssua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FPZ54_14430 (polA)
03410 Base excision repair
FPZ54_14430 (polA)
03420 Nucleotide excision repair
FPZ54_14430 (polA)
03440 Homologous recombination
FPZ54_14430 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssua03032
]
FPZ54_14430 (polA)
03400 DNA repair and recombination proteins [BR:
ssua03400
]
FPZ54_14430 (polA)
Enzymes [BR:
ssua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FPZ54_14430 (polA)
DNA replication proteins [BR:
ssua03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FPZ54_14430 (polA)
DNA repair and recombination proteins [BR:
ssua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FPZ54_14430 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FPZ54_14430 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
HHH
DprA_N
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QDX27084
UniProt:
A0A518RI20
LinkDB
All DBs
Position
complement(3056698..3059454)
Genome browser
AA seq
918 aa
AA seq
DB search
MPHLYLVDGSSFIFRAYHVLPKLTNKHGEPAGAVYGYVSMLWKLADDLHKADGPTHLAVI
LDKSEHTFRNELYDQYKAHRPPAPEDLVPQFPMIRDATRAFSLPCIEELGWEADDLIASY
AKAALAQGWQVTIVSSDKDLMQLLTEPGIDMLDTMKDRRMGPDTVVEKFGVGPDKLGEVL
ALMGDSVDNVPGVPGVGPKTAAKLILEHGDVEAVLAAAPMMKPGKLRDNLIEHADMARLS
RKLVELACDVPLPDPLDSMELNGIPEAPLRAFLEHHGFKSLLARLGQVADAPVERVEVPG
LEPDPPCDHDAYETVTDEAALDRWITVARHQGWVAIDTETTGTDAHRAELVGVSMALHPN
LACYIPVAHGGTDMFAEKPVQLDRATVIAKLKPLLEDPSVLKIGHNLKYDLIILGRLGID
VAPYDDTIVMSFDLDAGLHGHGMDELAATHLSHSCIAYKDVTGSGKKQIGFAEVDLKAAT
RYAAEDADVTLRLWRRLRPRLAYEGATRVYEMVDRPLVAVIAGMERAGIKVDATVLARLS
DEFSKQIASLEAEIHGIAGFKFTIGSPKQLGDVLFDKMGIKGGRKGKSGVYSTDVNELER
IAADKDSPGREMVVKVLDWRQLSKLKSTYTDALQAQINPETGRVHTSYSLTGAQTGRLSS
TDPNLQNIPIRTETGRQIRDAFVAEPGNVILSADYSQIELRLAAHIADVPALREAFEAGE
DIHNRTATELFGEVNRDTRGRAKTINFAILYGISRWGLAGRLDVTPDEAQAMIDRYFERF
PGISRYIADTLTSAKETGYTTTLFGRKTHFPRIKAPNQNERAGSERAAINAPIQGTSADI
IKRAMIRMGPALADAGLHDVRMLLQVHDELVFELPQGDVEAASAVIRRVMETAAQPAVTL
TVPLGVEIGVGPSWGAAH
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgccccatctctatcttgtcgacggctcgagctttatctttcgcgcctatcatgtgctt
cccaagctgacgaacaagcatggggagcccgcgggcgcggtctatggctatgtgtcgatg
ctgtggaagctggccgacgatctgcacaaggcggatgggccgacgcaccttgcggtgatc
ctcgacaagagcgagcatacgttccgcaacgagctgtacgaccagtataaggcgcaccgc
ccgcccgcgcccgaggatctggtgccgcaattcccgatgatccgcgacgccacccgcgcg
ttcagcctgccctgtatcgaggagctgggctgggaggcggacgacctgatcgccagctat
gccaaggcggcgctggcgcagggatggcaggtgacgatcgtcagttccgacaaggatctg
atgcagctgctgaccgaaccgggcatcgacatgctcgacacgatgaaggaccggcgcatg
ggtcccgatacggtggtcgagaaattcggggtcgggccggacaaattgggcgaggtgctg
gcgctgatgggcgacagcgtcgacaatgtcccgggtgtgccgggggtggggccgaagact
gcggccaagctgattctggagcatggcgatgtcgaggcagtgctggccgccgcgccaatg
atgaagccgggcaagctgcgcgacaatctgatcgaacatgccgatatggcgcggctgtcg
cgcaagctggtcgaactcgcctgcgacgtgccgctgcccgacccgctcgattcgatggag
ctgaacgggattccggaggcgccgctgcgcgcatttctggagcatcacgggttcaagtcg
ctgctcgcccggctgggacaggtggcggatgcgccggtcgaacgcgtcgaggttcccggg
ctggagcccgatccgccctgcgaccatgatgcctatgagaccgtaaccgacgaagcggcg
ctggatcgctggatcacggtcgcgcggcaccagggctgggtggcgattgataccgagacg
accggcaccgatgcgcatcgcgccgagctggtcggggtcagcatggcgctgcaccccaac
ctcgcctgttacatccccgtcgcgcatggcgggaccgacatgttcgccgaaaaaccggtg
cagctcgaccgcgccaccgtgatcgcgaagctcaagccgctgctcgaggacccctcggtg
ctcaagatcggccacaacctcaaatatgatctgatcattctggggcggctgggaatcgac
gtcgcgccctatgacgacacgatcgtgatgagcttcgatctcgatgccgggctgcacggc
catggcatggacgagctggcggcgacgcatctgtcgcacagctgcatcgcgtacaaggat
gtgaccgggagcgggaagaagcagatcgggttcgccgaagtcgatctgaaggcggcgacc
cgctacgccgccgaggatgccgacgtcacgctgcggctgtggcggcggctgaggccgcgg
cttgcctatgaaggcgcgacgcgggtctatgagatggtggaccggccgctggtcgcggtg
atcgccgggatggagcgcgcggggatcaaggtcgatgccaccgtacttgcccgtctgtcg
gatgaattttcgaagcagattgcgagcctggaggcggagattcacggcatcgccgggttc
aaattcaccatcggcagcccgaagcaattgggcgatgtgctgttcgacaagatggggatc
aagggcgggcgcaagggcaagagcggcgtctattcgaccgacgtcaacgagctggagcgg
atcgcggcggacaaggattcgccgggacgcgagatggtggtgaaggtgctcgactggcgg
cagctttcaaagctcaaatccacctataccgacgcgcttcaggcgcagatcaacccggag
acggggcgggtgcataccagctacagcctcaccggcgcgcagaccgggcggctgtcgtcg
accgacccgaacctccagaacatcccgatccgtaccgagacggggcgccagatccgcgat
gcattcgtcgccgagccgggcaatgtcatcctgtccgccgactattcgcagatcgaactg
cgcctcgccgcgcatatcgccgacgtgcccgctctgcgggaagcgttcgaggcgggggag
gacatccacaaccgcaccgcgaccgaactgttcggcgaggtcaatcgcgacacgcgcgga
cgggcgaagacgatcaacttcgcgatcctctatggcatctcgcgttggggactggcgggc
cggctcgacgtgacgcccgacgaggcacaggcgatgatcgaccgctatttcgaacgcttc
ccggggatcagccgctatatcgccgacacgctgaccagcgccaaggaaacgggctacacg
accacattgttcggacggaagacacattttccgcggatcaaggcgcccaaccagaatgag
cgtgcgggcagcgagcgtgcggcgatcaacgcgccgatccagggcaccagcgccgacatt
atcaagcgcgcgatgatccgcatgggccccgcgctggccgacgccggcctgcatgacgtc
aggatgctgctgcaggtgcatgacgaactggtgttcgaactgccccagggcgatgtcgag
gctgcgtcggcggtgatccgccgggtgatggaaaccgcagcgcaaccggcggtgacgctc
acggtgccgctgggggtcgaaatcggcgtcgggccgagctggggcgcggcgcattga
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