Sphingomonas suaedae: FPZ54_14865
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Entry
FPZ54_14865 CDS
T07976
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ssua
Sphingomonas suaedae
Pathway
ssua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FPZ54_14865 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssua03019
]
FPZ54_14865 (pnp)
03016 Transfer RNA biogenesis [BR:
ssua03016
]
FPZ54_14865 (pnp)
Enzymes [BR:
ssua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FPZ54_14865 (pnp)
Messenger RNA biogenesis [BR:
ssua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FPZ54_14865 (pnp)
Transfer RNA biogenesis [BR:
ssua03016
]
Prokaryotic type
tRNA degradation factors
FPZ54_14865 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_2
Motif
Other DBs
NCBI-ProteinID:
QDX27157
UniProt:
A0A518RI42
LinkDB
All DBs
Position
3136948..3139281
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AA seq
777 aa
AA seq
DB search
MFDKKTVSIEWGGQTLTLETGQVARQADGAVMATLGETVVLCAVTAAKSVKEGQDFFPLT
VHYQEKFSAAGRIPGGFFKRERGATEKETLTSRLIDRPIRPLFPEGFYNEINVICQVLSY
DGENEPDILAMVAASAALTISGVPFMGPIGAARVGYVDGEYVLNPTNEQVAEGDLDLVVA
ATGNAVMMVESEAKELSEEVMLGAVQFAHKACKQAAGAIIDLAEQAAKDPWEMAEQADLS
AAKDKLKKLIGKDIAAAYKVTDKSKRSGLLNDARAKAKEAFADATPQDQMAAMKLVKKLE
AEIVRGAILKDGTRIDGRSTTQIRPIEAMVHFLPRAHGSALFTRGETQAICTTTLGTKDA
EQMIDGLDGLSYSNFMLHYNFPPYSVGEVGRFGAPGRREVGHGKLAWRALHPVLPSKDEF
PYTIRVLSDITESNGSSSMATVCGGSLSMMDAGVPLKRPVSGIAMGLILEGKDFAILSDI
LGDEDHLGDMDFKVAGTSEGITTMQMDIKVAGITDEIMRVALEQAKEGRAHILGEMSKAL
GETRTELSAHAPRIETMQIDKSKIRDVIGTGGKVIREIVATTGAKVDIDDEGIIKVSSSD
VSQIEAAMNWIKGIVEEAEVGKIYNGKVVNLVDFGAFVNFMGGKDGLVHVSEIKNERVEK
VSDVLSEGQEVKVKVLEIDQRGKVRLSMRVVDQETGEELEDTRPAREPRERGERGDREGG
RGGDRRREGGRGGDRDRGPRRDRGDRNDRPRGERSEAKDEGGETIGLPAFLTGGNDD
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacaagaagaccgtatcgatcgagtggggcggacaaaccctgacactcgaaacc
gggcaggttgcccgtcaggccgatggcgccgtgatggcgacgctcggcgaaaccgtggtg
ctgtgcgccgtcaccgccgccaagtcggtgaaggaagggcaggatttcttcccgctcacc
gtgcactatcaggaaaaattctcggccgccgggcgcatcccgggcggcttcttcaagcgt
gagcgcggcgcgaccgaaaaggaaacgctgaccagccgcctgatcgaccgtccgatccgc
ccgttgttcccggaagggttctacaacgagatcaacgtgatctgccaggtgctgtcctat
gacggcgagaatgagccggacatcctcgcgatggtcgcggcgtccgcagccctcaccatt
tcgggcgtgccgttcatgggcccgatcggcgccgcgcgcgtcggctatgtcgatggcgag
tacgttctcaacccgaccaacgagcaggtcgccgagggtgatctggacctggtcgtcgcc
gccaccggcaatgcggtgatgatggtcgaatccgaagccaaggagctgtcggaagaggtc
atgctgggcgcggtccagttcgcgcacaaggcgtgcaagcaggccgcgggcgcgatcatc
gacctggccgagcaggctgcgaaggatccgtgggaaatggccgagcaggccgacctgtcg
gccgccaaggacaagctcaagaagctgatcggcaaggatatcgccgccgcctacaaggtg
accgacaagtccaagcgttcgggcctgctcaacgatgcgcgggccaaggcgaaggaagcg
ttcgccgacgccacgccgcaggatcagatggccgcgatgaagctggtcaagaagctggaa
gcggagatcgtccgcggcgccatcctgaaggacggcacccgcatcgacggccgctcgacc
acccagatccgtccgatcgaggcgatggtccacttcctgccgcgcgcgcatggttcggca
ctgttcacgcgtggcgagacgcaggcgatctgcaccaccacgctgggtaccaaggacgcc
gagcagatgatcgacgggctggacggcctgtcctattcgaacttcatgctccactataac
ttcccgccctattcggtcggtgaagtcggccgcttcggcgcgccgggccgtcgcgaagtc
ggccatggcaagctggcctggcgcgcgctgcacccggtgctgccgagcaaggacgagttc
ccctatacgatccgcgtcctgtcggacatcaccgagtcgaacggctcgtcgtcgatggcc
accgtgtgcggcggttcgctgtcgatgatggacgcgggcgttcccctcaagcgtccggtg
tcgggcatcgccatgggcctgatcctggaaggcaaggatttcgcgatcctgtccgacatc
ctgggtgacgaggatcatctcggcgacatggacttcaaggttgcgggcacgtccgaaggc
atcaccacgatgcagatggacatcaaggtcgccggcatcaccgacgagatcatgcgcgtc
gcgttggaacaggccaaggaaggccgcgcgcacatcctgggcgaaatgtccaaggcactg
ggcgaaacccgcaccgaactgtcggcccatgccccgcgcatcgagacgatgcagatcgac
aagtcgaagatccgcgacgtcatcggcaccggcggcaaggtgatccgcgagatcgtcgcc
accaccggcgccaaggtcgatatcgacgacgaaggcatcatcaaggtgtcgtcgtccgac
gtcagccagatcgaagccgcgatgaactggatcaagggcatcgtcgaagaggcggaagtc
ggcaagatctacaacggcaaggtcgtcaacctggtcgacttcggtgcgttcgtgaacttc
atgggcggcaaggacggtctcgtccacgtctccgagatcaagaacgagcgggtcgagaag
gtcagcgacgtcctgagcgaaggccaggaagtcaaggtcaaggtcctcgagatcgaccag
cgcggcaaggttcgcctgtcgatgcgcgtcgtcgatcaggagaccggcgaagagctggag
gacacccgtccggcgcgtgaaccgcgcgagcgcggcgagcgtggcgaccgcgaaggcggc
cgtggcggcgaccgccgtcgcgagggtggccgtggcggcgaccgcgatcgcggcccgcgc
cgcgaccggggagaccgcaacgatcgcccgcgcggcgagcgttcggaagcgaaggacgag
ggcggcgagacgatcggcctccccgccttcctgaccggcggcaatgacgactga
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integrated database retrieval system
