Sphingomonas suaedae: FPZ54_17220
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Entry
FPZ54_17220 CDS
T07976
Name
(GenBank) 3'-5' exonuclease
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
ssua
Sphingomonas suaedae
Pathway
ssua03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FPZ54_17220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssua03400
]
FPZ54_17220
DNA repair and recombination proteins [BR:
ssua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
FPZ54_17220
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QDX27573
UniProt:
A0A518RJF0
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All DBs
Position
3636791..3637549
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AA seq
252 aa
AA seq
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MAAAPQIIRVIDLETTGNAPPAHAVCEIGWQDVKLGGDGRWELDGEGGSRLVNPGRPIPP
LTMAVHHIRDVDVADAPWWHDVARPILDPWPRRVALAAHRASFEEQFCTSALTRGADWIC
TYKCALRLWPDSPGFSNQFLRYYRMPEGMEHERGLPVHRAFPDAYVTAHHLRDMLNEASV
AQLIEWSKLPGLLPRVRYGPDRGKEWSEIDDDSLDAFLQDRDEDIRYTAQVELERRRGGG
PVRAPARQPQLF
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgccccccagatcattcgcgtcatcgatctcgaaacgaccggcaacgccccg
cccgcgcacgccgtgtgcgaaatcggctggcaggacgtgaagctgggcggagacgggcgg
tgggagctggatggcgaaggcggcagccgtctggtcaatcccgggcgtccgatcccgccg
ctcaccatggcggtgcatcatatccgcgacgtggacgttgcggacgcgccctggtggcac
gacgtcgcgcgtccgatcctcgatccctggccgcgccgcgtcgcgctcgccgcgcaccgg
gcgagcttcgaggagcagttctgcacctccgcgctgacgcggggtgccgactggatctgc
acctataaatgcgctttgcggctatggccggacagccccggtttctcgaaccagttcctg
cgctattatcggatgccggaggggatggagcatgaacgcggcctgccggtccatcgcgca
tttcccgacgcctatgtcaccgcgcaccatctgcgcgacatgctcaacgaagcgagcgtc
gcgcagctgatcgaatggtcgaagctgcccggattgctcccccgcgtccgctacggcccc
gatcgcggcaaggagtggagcgagatcgacgacgattcgctcgacgccttcctccaggat
cgcgacgaagacatccgctacaccgcccaggtcgaactggagcggcggcgcggcggtggc
cccgtccgtgccccggcgcgtcagccgcaattattctga
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