Sphingomonas suaedae: FPZ54_17305
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Entry
FPZ54_17305 CDS
T07976
Name
(GenBank) PAS domain S-box protein
Organism
ssua
Sphingomonas suaedae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_4
PAS_9
HATPase_c
Response_reg
PAS
PAS_8
GAF
HisKA
GAF_2
PAS_11
CshA_repeat
Motif
Other DBs
NCBI-ProteinID:
QDX28355
UniProt:
A0A518RLM7
LinkDB
All DBs
Position
complement(3654689..3658027)
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AA seq
1112 aa
AA seq
DB search
MGRRIREHDWTDHPLGPPEGWPQPLLFALGICMSSQFPTAIYWGSGLHLFYNDAWAPIPA
ERHPKALGQRGQDVFPEIWDVVGPQFETVLETGQGFATYDQRLDMMRGGRIHETYWNYSF
TPIRDEYGTVCGVLNQGNETTRTVMGERARLAEVERLHELFQQSPGAVALLRGPTHIFEM
ANPAYAELVGHRALLGKPLAQALPEVVDQGFVALLDDVFASGRPFRASGTPVILDRGGRS
ETRLLDFVYQPIKDSNGVTTDIFVEANDVTERAMTEARLRQSEERLQLALDASNGVGTWD
WDVRDGVVRADSRFARLYGVDPTTAEQGGPIELFFRKVHPDDAERVRAEIEQAMRSGDRF
ASEYRLTDPQGRLRWVNAQGRCSYDAEGRPLRFPGVSVDVTERHLAEEAARRAAADLKAA
TQDQAFVHDLADRQRALDSPEAIMAMSAEALADRLKIDRVGFYRVGTEGKIVFGPSFTTG
ALPALRGGMAIEDLGPASADYREGRTLVVIDSAADGAYAGTGLARYSPSAVGVPLMRGGA
WVASLYANHATPREWRREEVALIEAVAQSAWDAVERAGAVTALRESEAKFRAIANSIDPM
VWSTQPDGYHDYYNDRWYEFTGVPYGSTDGTGWNDMFHPEDQERAWTLWRHCLETGEPYH
IEYRLRHHDGGYRWVLGRAQPVRGEDGAIIRWFGTCTDIQDIVDAREVLARSREELEQAV
EERTRQLMSVEERLRQAQKMEAIGQLTGGIAHDFNNMLAVVIGALDILERRIAQGSTDLD
RYIVAARDGATRAAALTQRLLGFARQQPLAPAPVDVNALVGGMIELLMRTLGEDVTVETR
LATGLHTALIDPSLLENVILNLSVNARDAMPGGGLLTIETENCVLDAGEAAELGLGAGDY
VALTVADTGSGMTPETAARAFDPFFTTKGVGKGTGLGLSQVFGFARQSGGHVGIDSEPGR
GTRVRLLLPRHSVADSDQSTPRGGTAIPHGSRDEVILVVEDEERVRNYSVEALRELGYTV
LQAPDGIEALRVIERDQRISLLFTDVMMPDMNGDELARVARTRQPGLKVLYTSGYTPDQT
VIETHAAGEVQLLPKPFGVEALAIRIRAALDT
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgggccgccgcattcgggaacatgactggaccgaccatccgctcggcccgccggagggc
tggccgcagccgcttctcttcgcgctcggcatctgcatgagttcgcaattcccgacggcc
atttattggggtagcgggctgcacctgttctacaatgacgcctgggcaccgatccccgcc
gaacgccaccccaaagccctggggcagcgggggcaggatgtgtttcccgagatctgggat
gtggtcggaccccagttcgaaacagtgctggaaaccggccaggggtttgccacctatgac
cagcggctcgacatgatgcgcggggggcgcatccacgagacctattggaattacagcttc
accccgatccgcgacgaatatggcaccgtctgcggcgttctgaaccagggaaacgagacc
acccggaccgtcatgggggaacgcgcgcgcctcgccgaggtcgagcgattgcatgaattg
ttccagcagtcgccgggagcggtcgcgctgctgcgcgggccgacccatatcttcgagatg
gcgaacccggcctatgccgagctggtcggccatcgcgcgctgctcggcaaaccgctggcg
caagcgctgccggaggtggtggatcagggctttgtcgcgttgctcgacgacgtcttcgcc
agcggcaggccattccgcgcgagcggtacaccggtcattctcgaccgcggcggtcgcagc
gagacccgattgctcgatttcgtctatcagccaatcaaggacagcaacggcgtcaccacc
gacatttttgtcgaggcgaacgacgtcaccgaacgcgcgatgaccgaggcgcggctgcgg
caaagcgaggaacggcttcaacttgcgctcgatgcctcgaacggggtcggcacctgggac
tgggacgtgcgcgacggcgtggtccgcgccgacagccgctttgcgcgtctgtatggcgtg
gatccgacgacggccgaacagggcgggccgatcgagctgttctttcgcaaggtccatccc
gacgacgccgaacgggtgcgcgccgaaatcgaacaggcgatgcgcagcggcgatcggttc
gccagcgaatatcgcctgaccgacccacaggggcggctgcgctgggtcaatgcccagggg
cgatgcagctatgacgcggagggccgtccgctacgcttcccgggcgtaagcgtggatgtg
accgaacggcatctggccgaagaagccgcgcgccgtgccgccgccgacctcaaggccgcg
acgcaggatcaggcattcgtccacgacctggccgatcgccagcgcgcgctcgactccccc
gaagcgatcatggcgatgagtgcagaggctctggcggatcggctgaaaatcgaccgggtc
ggtttctatcgcgtcgggactgagggcaagatcgtgttcgggccgtcgtttacgaccggc
gcgcttcccgcgttaaggggcgggatggcgatcgaagatctgggtccggccagtgcggac
tatcgcgagggtcgcacgctggtcgtcatcgattccgccgcggacggcgcctatgccggg
acgggccttgcccgctattccccctcggcagtcggcgtgccgttgatgcgcggcggcgct
tgggtggccagcctctacgccaaccacgcgaccccgcgcgaatggcggcgcgaggaagtg
gcattgatcgaagcggtcgcgcaatccgcctgggacgcggtggagcgcgccggggccgtc
accgcgctgcgcgaaagcgaggcgaagttccgggccatcgccaattcgatcgatccgatg
gtctggtcgacgcagcccgacggctatcacgattattacaatgatcgctggtacgaattc
accggcgtcccttatggctcgaccgatggcacggggtggaacgatatgttccatccggag
gatcaggagcgtgcctggacgctgtggcggcactgcctggagacgggcgaaccctatcat
atcgaatatcggttgcggcatcatgacggcggttatcgctgggtgctgggccgggcgcag
ccggtgcgcggggaggacggtgcgatcattcgctggttcgggacctgcaccgacatccag
gatatcgtcgatgcccgcgaagttctggcgcgatcgcgcgaggaactggagcaggccgtc
gaggaacgcacccggcagctgatgagcgtcgaggagcggctgcgtcaggcgcagaagatg
gaggcgatcggccagctgaccggcgggatcgcgcatgatttcaacaacatgctcgcggtg
gtgatcggcgcgctcgacatattggagcggcggattgcgcagggttcgaccgatctcgat
cgctatatcgtcgcggcgagagacggcgcgacccgcgcggcggcgctgacccagcgactg
ctcggttttgcgcgacagcagccgcttgctcccgcgccggtcgatgtcaacgcgctggtc
ggcgggatgatcgaattgctgatgcgtacgctgggtgaggatgtgaccgtggagacgcgg
ctcgcaacgggcctgcacacggcattgatcgatcccagcctgctcgaaaatgtcatcctc
aacctctcggtaaacgcacgcgatgcgatgcccggcggcggattgctgacgatcgagacg
gagaattgcgtgctcgacgcgggcgaggcggccgaactcgggctgggcgcgggggattat
gtggcgctgacggtcgccgataccggatcgggcatgacccccgaaaccgcagcgcgtgcg
ttcgacccgtttttcaccaccaagggggtgggtaagggaaccgggcttggcctcagccag
gtgttcggtttcgcccggcaatcgggcggccatgtcggcatcgacagcgagccggggcgt
ggcacgcgcgtacggctgctgttgccccggcacagcgtcgccgacagcgaccaaagcaca
ccgcgaggcggtacagcgatcccccatggctcgcgcgatgaggtgattctggtggtggag
gacgaggagcgcgtccgcaactattcggtcgaggcgttgcgcgagctgggctacaccgtg
ctccaggcgcccgacgggatcgaagcgctgcgggtgatcgagcgcgatcagcgcatctcg
ctgttattcaccgacgtgatgatgcccgacatgaacggcgacgaactcgcccgggttgcg
cggacgcggcagcccggtctcaaggtcctctatactagcggctatacgcccgatcagacc
gtcatcgaaacgcacgccgctggggaagttcaactgcttcccaagccgttcggggtcgag
gcgctggcgatccggatccgcgcggcgctcgacacctga
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integrated database retrieval system
