Sphingomonas suaedae: FPZ54_17580
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Entry
FPZ54_17580 CDS
T07976
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ssua
Sphingomonas suaedae
Pathway
ssua03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FPZ54_17580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssua03400
]
FPZ54_17580
Enzymes [BR:
ssua01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FPZ54_17580
DNA repair and recombination proteins [BR:
ssua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FPZ54_17580
Prokaryotic type
FPZ54_17580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QDX27638
UniProt:
A0A518RJL0
LinkDB
All DBs
Position
3717861..3718538
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AA seq
225 aa
AA seq
DB search
MAVNLHPDWLEPLQREFDSPYMAALRQFLLEEKAAGKRIFPRGRDWFRALDLTPPSSIRV
VILGQDPYHGEGQAHGLCFSVQPGVRVPPSLVNIYKELKADLGIDPPGHGFLEHWAKQGV
LLLNNVLTVEMGLAASHKGRGWERFTDAVVAHVNALPDPVVFMLWGSHAQKKAASVDPRH
LVLKSVHPSPLSAHGGFFGCRHFSKANAFLEANGRGAIDWALPPV
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcaatctccatcccgactggctcgaaccgctccagcgcgaattcgatagcccg
tacatggccgcgctgcgccagttcctgctggaggagaaagcggcgggcaagcgcattttc
ccgcgcgggcgtgattggttccgcgcgctcgatcttaccccgccgtccagcatccgcgtc
gtgatcctggggcaggatccctatcatggtgaggggcaggcgcatggcctgtgcttctcg
gtccagcccggcgtccgcgtgccgccgagcctggtcaatatctacaaggagctgaaggcc
gatctcggcattgatccgcccggccacggcttcctcgagcattgggcgaagcagggcgtg
ttgctgctcaacaacgtcctgacggtcgagatggggctggcggcgtcgcacaaggggcgg
gggtgggagcggttcactgacgcggtcgtcgcgcatgtcaacgcgctgcccgatccagtg
gtgttcatgctgtggggcagccacgctcagaaaaaggctgcgtcggtcgatccgcggcat
ctggtgctcaaatcggtccacccgtcgccgctctcggcgcacggcggctttttcgggtgt
cggcatttctcgaaggcgaacgccttccttgaagcgaacgggcgcggcgcgatcgactgg
gcgctgcccccggtttga
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