Sphingomonas suaedae: FPZ54_17655
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Entry
FPZ54_17655 CDS
T07976
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ssua
Sphingomonas suaedae
Brite
KEGG Orthology (KO) [BR:
ssua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssua03016
]
FPZ54_17655
Enzymes [BR:
ssua01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FPZ54_17655
Transfer RNA biogenesis [BR:
ssua03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FPZ54_17655
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QDX27650
UniProt:
A0A518RJP2
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All DBs
Position
3731585..3732205
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AA seq
206 aa
AA seq
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MAVYLHEEDLPADVFAPGADIAVDTETMGLITPRDRLCLVQLSDGGADEHLVRFGPGSDY
AAPNLRALLADPERVKLYHFARFDLAAIRHYLGVVAAPVYCTKIASRLVRTYTDRHGLKD
LVRELLGQEISKQQQSSDWGGPVLSDAQKDYAASDVRYLHAMREELDRRLAREGRTALAQ
ACFDFLPHRADLDLAGWPETDIFAHV
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggccgtttacctgcacgaagaagacctgcccgcggacgtattcgcgccgggcgccgat
atcgccgtcgataccgagacgatgggcctcatcacgccgcgcgaccggctgtgcctcgtc
caactgtccgatggcggcgccgacgagcatctggtgcggttcgggccgggcagcgactat
gccgcgccgaacctgcgcgcgctgctcgccgacccggaacgggtaaagctctatcatttc
gcgcgcttcgatctcgccgcgatccgccattatctgggcgtcgtcgccgcgccggtctat
tgcaccaagatcgcctcgcgcctcgtgcggacctataccgatcggcacgggctcaaggat
ctcgtccgcgagctgctggggcaggagatcagcaagcagcagcaatcgtccgactggggc
gggccggtgctgtccgacgcgcagaaggattatgctgcgtccgacgtgcgctatctccac
gcgatgcgcgaggagctcgaccgccgcctggcgcgtgaagggcggacggcgctggcgcag
gcctgtttcgactttctgccgcaccgcgccgatctcgatctcgcgggatggcccgaaacc
gatatcttcgcgcatgtctga
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